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About Anne Brown


Name:Anne V. Brown
Email:anne.brown@usda.gov
Telephone:(515) 294-3905
ORCID:0000-0001-5175-6252

Address:
819 Wallace Road
1023 Crop Genome Informatics Lab
Iowa State University
Ames IA, 50011
Education
B.S. Crop Science, University of Illinois Champaign/Urbana, 2011
Ph.D. Plant Breeding and Genetics, Purdue University, 2016
 
Research Interests:I have interests in applications of Genetics, Genomics, and Bioinformatics towards food security. Currently there are over 220,000 soybean accessions in germplasm collections worldwide, making the identification of useful germplasm difficult. My project focuses on merging and integrating soybean genotyping datasets from international studies to characterize international germplasm collections to identify redundancy and unique accessions.
Publications
     Valliyodan, B., Cannon, S.B., Bayer, P.E., Shu, S., Brown, A.V., Ren, L., Jenkins, J., Chung, C.Y., Chan, T., Daum, C.G., Plott, C., Hastie, A., Baruch, K., Barry, K.W., Huang, W., Patil, G., Varshney, R.K., Hu, H., Batley, J., Yuan, Y., Song, Q., Stupar, R.M., Goodstein, D.M., Stacey, G., Lam, H., Jackson, S.A., Schmutz, J., Grimwood, J., Edwards, D. and Nguyen, H.T. 2019. Construction and comparison of three reference-quality genome assemblies for soybean. Plant J. Accepted Author Manuscript. doi:10.1111/tpj.14500
     Assefa, T., Otyama, P.I., Brown, A.V., Kalberer, S.R., Kulkarni, R.S. and Cannon, S.B., 2019. Genome-wide associations and epistatic interactions for internode number, plant height, seed weight and seed yield in soybean. BMC Genomics. doi:10.1186/s12864-019-5907-7
     Assefa, T., Rubyogo, J.C., Blair, M.W., Mahama, A.A., Cannon, E.K.S., Brown, A.V., Cannon, S.B. 2019. A Review of Breeding and Genomics Resources for Common Bean (Phaseolus vulgaris L.) Mol Breeding. doi:10.1007/s11032-018-0920-0
     Brown, A.V., Campbell, J.D., Assefa, T., Grant, D., Nelson, R.T., Weeks, N.T, Cannon, S.B. 2018. Ten Quick Tips for Sharing Open Genomic Data. PLoS Computational Biology. doi:10.1371/journal.pcbi.1006472
     Brown, A.V., Hudson, K.A. 2017. Transcriptional profiling of mechanically and genetically sink-limited soybeans. Plant Cell and Environment. doi:10.1111/pce.13030.
     Brown, A.V., Hudson, K.A. 2015. Developmental profiling of gene expression in soybean trifoliate leaves and cotyledons. Biomed Central (BMC) Plant Biology. doi:10.1186/s12870-015-0553-y





Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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