SoyBase
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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
Follow us on Twitter @SoyBaseDatabase
Learn About The SoyBase Database And Soybeans
| Name: | Anne V. Brown |
|---|---|
| Email: | anne.brown@usda.gov |
| Telephone: | (515) 294-3905 |
| ORCID: | 0000-0001-5175-6252 |
Address: | 819 Wallace Road 1023 Crop Genome Informatics Lab Iowa State University Ames IA, 50011 |
| Education | |
| B.S. Crop Science, University of Illinois Champaign/Urbana, 2011 | |
| Ph.D. Plant Breeding and Genetics, Purdue University, 2016 | |
| Research Interests: | I have interests in applications of Genetics, Genomics, and Bioinformatics towards food security. Currently there are over 220,000 soybean accessions in germplasm collections worldwide, making the identification of useful germplasm difficult. My project focuses on merging and integrating soybean genotyping datasets from international studies to characterize international germplasm collections to identify redundancy and unique accessions. |
| Publications | |
| Valliyodan, B., Cannon, S.B., Bayer, P.E., Shu, S., Brown, A.V., Ren, L., Jenkins, J., Chung, C.Y., Chan, T., Daum, C.G., Plott, C., Hastie, A., Baruch, K., Barry, K.W., Huang, W., Patil, G., Varshney, R.K., Hu, H., Batley, J., Yuan, Y., Song, Q., Stupar, R.M., Goodstein, D.M., Stacey, G., Lam, H., Jackson, S.A., Schmutz, J., Grimwood, J., Edwards, D. and Nguyen, H.T. 2019. Construction and comparison of three reference-quality genome assemblies for soybean. Plant J. Accepted Author Manuscript. doi:10.1111/tpj.14500 | |
| Assefa, T., Otyama, P.I., Brown, A.V., Kalberer, S.R., Kulkarni, R.S. and Cannon, S.B., 2019. Genome-wide associations and epistatic interactions for internode number, plant height, seed weight and seed yield in soybean. BMC Genomics. doi:10.1186/s12864-019-5907-7 | |
| Assefa, T., Rubyogo, J.C., Blair, M.W., Mahama, A.A., Cannon, E.K.S., Brown, A.V., Cannon, S.B. 2019. A Review of Breeding and Genomics Resources for Common Bean (Phaseolus vulgaris L.) Mol Breeding. doi:10.1007/s11032-018-0920-0 | |
| Brown, A.V., Campbell, J.D., Assefa, T., Grant, D., Nelson, R.T., Weeks, N.T, Cannon, S.B. 2018. Ten Quick Tips for Sharing Open Genomic Data. PLoS Computational Biology. doi:10.1371/journal.pcbi.1006472 | |
| Brown, A.V., Hudson, K.A. 2017. Transcriptional profiling of mechanically and genetically sink-limited soybeans. Plant Cell and Environment. doi:10.1111/pce.13030. | |
| Brown, A.V., Hudson, K.A. 2015. Developmental profiling of gene expression in soybean trifoliate leaves and cotyledons. Biomed Central (BMC) Plant Biology. doi:10.1186/s12870-015-0553-y | |
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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