---
taxid: 3818
genus: Arachis
species: hypogaea
abbrev: arahy
commonName: peanut
description: "Peanut (Arachis hypogaea) was domesticated at the foot of the South American Andes within modern-day Argentina, Bolivia, or Paraguay. Cultivated peanuts are allotetraploids, with sub-genomes probably contributed by the hybridization of the diploid species Arachis duranensis and Arachis ipaensis."

resources:
  -
    name: PeanutMine
    URL: "https://mines.legumeinfo.org/peanutmine/begin.do"
    description: "InterMine interface for accessing genetic and genomic data for several species in Arachis."
  -
    name: ZZBrowse
    URL: "https://zzbrowse.legumeinfo.org/?tab=WhGen&datasets=Peanut%20GWAS&chr=Arahy.01&selected=100000&window=250000&datasets2=Soybean%20GWAS&chr2=Gm01&selected2=100000&window2=250000"
    description: "Association viewers (QTL, GWAS)"
  -
    name: Gigwa
    URL: "https://peanutbase.org/germplasm/gigwa"
    description: "Genetic variation viewer "
  -
    name: GCViT
    URL: "https://peanutbase.org/germplasm/gcvit"
    description: "Genetic variation viewer "
  -
    name: Genome Context Viewer
    URL: "https://legumeinfo.org/gcv2/gene;lis=arahy.P7Z3M8?q=arahy.CMRI1Q&sources=lis&algorithm=repeat&match=10&mismatch=-1&gap=-1&score=30&threshold=25&bmatched=20&bintermediate=10&bmask=10&linkage=average&cthreshold=20&neighbors=10&matched=4&intermediate=5&bregexp=&border=chromosome&regexp=&order=distance"
    description: "Browser for dynamically discovering and viewing genomic synteny across selected species."
  -
    name: Germplasm GIS
    URL: "https://legumeinfo.org/germplasm/map#?zoom=5&maxRecs=1000&taxonQuery=Arachis&traitOverlay=&traitScale=global&country=&geocodedOnly&traitExcludeUnchar=false&limitToMapExtent=false&lat=-15.71&lng=-62.62&mapHeight=430&baseMap=ESRI%20-%20NatGeo%20(default,%20reference%20map)&ne_lat=-6.446317749457646&ne_lng=-38.3203125&sw_lat=-24.56710835257599&sw_lng=-86.923828125&accessionIdsInclusive=false"
    description: "Geographic information system viewer, showing collection locations for Arachis data held by the U.S. National Plant Germplasm System."

strains:
  -
    identifier: Tifrunner
    accession: "CV-93, PI 644011"
    name: Tifrunner
    origin: Southeastern United States
    description: "Cultivar Tifrunner is a runner-type peanut bred in the United States and widely planted as a variety and widely used in breeding programs. The genome of this cultivar is described in Bertioli et al., 2019 (doi:10.1038/s41588-019-0405-z)."
    resources:
      -
        name: Peanutbase Genome Browser (GBrowse)
        URL: "https://peanutbase.org/gbrowse_peanut1.0"
        description: "GBrowse for Tifrunner assemblies 1.0 and 2.0"
      -
        name: Peanutbase Genome Browser (JBrowse)
        URL: "https://peanutbase.org/node/319881/?data=arahy.Tifrunner.gnm1"
        description: "JBrowse for Tifrunner assembly 1.0"
      -
        name: LIS SequenceServer
        URL: "https://legumeinfo.org/sequenceserver/"
        description: "SequenceServer BLAST against the Tifrunner v2 assembly"
  -
    identifier: Fuhuasheng
    accession: GH00910
    name: Fuhuasheng
    origin: North China
    description: "The mid-twentieth century landrace Fuhuasheng, from North China, is a widely used parent from which ∼70% of Chinese peanut cultivars released during the past half century have been derived."
  -
    identifier: Shitouqi
    accession: zh.h0235
    name: Shitouqi
    origin: China
    description: "A. hypogaea var. Shitouqi (zh.h0235), the most widely cultivated peanut ecotype in the world, is a Chinese cultivar and breeding parent belonging to subspecies fastigiata, botanical type vulgaris and agronomic type Spanish with heterozygosity only 1/6,537 nucleotides on average."