---
identifier: mixed.mrk.Axiom_Arachis_58K_SNP

provenance: "Data in this directory derives from a project from the publication by Pandey, Agarwal et al., (2017; see citation field). Placement of the markers on the A. duranensis and A. ipaensis genome assemblies was done by Josh Clevenger in November, 2016, and evaluation and selection of 15746 markers that are polymorphic in A. hypogaea was done by Ye Chu and Josh Clevenger in 2016."

source: "http://data.legumeinfo.org/"

synopsis: Selected SNP markers (15746) from the 2016 58k Axiom Arachis array.

scientific_name: Arachis

taxid: 3817

scientific_name_abbrev: arach

genotype:
  - A. hypogaea accession
  - A. duranensis accession
  - A. ipaensis accesssion

description: "Selected SNP markers from the 2016 58k Axiom Arachis array. The data set contains 15746 markers that are polymorphic in A. hypogaea, and could be mapped to the diploid reference assemblies A. duranensis and A. ipaensis."

original_file_creation_date: "2016-11-01"

local_file_creation_date: "2017-02-10"

publication_doi: 10.1038/srep40577

dataset_release_date: "2017-02-10"

publication_title: "Development and Evaluation of a High Density Genotyping Axiom_Arachis Array with 58K SNPs for Accelerating Genetics and Breeding in Groundnut"

contributors: "Manish K. Pandey, Gaurav Agarwal et al. (see citations)"

data_curators: Steven Cannon 

public_access_level: public

license: open

keywords: Arachis, peanut, SNP markers, 58k array

citation: "Manish K. Pandey, Gaurav Agarwal, Sandip M. Kale, Josh Clevenger, Spurthi N. Nayak, Manda Sriswathi, Annapurna Chitikineni, Carolina Chavarro, Xiaoping Chen, Hari D. Upadhyaya, Manish K. Vishwakarma, Soraya Leal-Bertioli, Xuanqiang Liang, David J. Bertioli, Baozhu Guo, Scott A. Jackson, Peggy Ozias-Akins & Rajeev K. Varshney. Development and Evaluation of a High Density Genotyping Axiom_Arachis Array with 58K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports 7:40577 (2017)."