---
identifier: mixed.rpt.XJGZ

provenance: "This repository is a secondary source for these files. The primary repository is the NCBI GSS database, under accessions DE998420-DE998923 and DH968257-DH968767. The files here are held as part of the PeanutBase, LegumeInfo, and LegumeFederation projects."

source: "https://peanutbase.org/data/"

synopsis: "Genomic repetitive elements: miniature inverted-repeat transposable elements (MITEs)"

scientific_name: Arachis

taxid: 3817

scientific_name_abbrev: arach

genotype:
  - mixed

description: "File arasp.mixed.rpt1.XJGZ.repeats_MITE1.fna (formerly AhMITE1.txt) is from Kenta Shirasawa and David Bertioli, May 24, 2013. These sequences are also deposited to the NCBI GSS database under the accession no. DE998420-DE998923 and DH968257-DH968767."

dataset_doi: 10.1007/s00122-012-1798-6

genbank_accession: DE998420-DE998923, DH968257-DH968767

original_file_creation_date: "2016-01-14"

local_file_creation_date: "2017-10-16"

publication_doi: 10.1007/s00122-012-1798-6

dataset_release_date: "2014-01-01"

publication_title: "Characterization of active miniature inverted-repeat transposable elements in the peanut genome"

contributors: "Kenta Shirasawa, Hideki Hirakawa, Satoshi Tabata, Makoto Hasegawa, Hiroyuki Kiyoshima, Sigeru Suzuki, Sigemi Sasamoto, Akiko Watanabe, Tsunakazu Fujishiro, Sachiko Isobe"

data_curators: Steven Cannon

public_access_level: public

license: Open

keywords: Arachis, peanut, MITE, transposable elements

citation: "Kenta Shirasawa, Hideki Hirakawa, Satoshi Tabata, Makoto Hasegawa, Hiroyuki Kiyoshima, Sigeru Suzuki, Sigemi Sasamoto, Akiko Watanabe, Tsunakazu Fujishiro, Sachiko Isobe. Characterization of active miniature inverted-repeated transposable elements in the peanut genome. Theor Appl Genet (2012) 124: 1429."