SoyBase Follow us on Twitter @SoyBaseDatabase
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.16G068500

Feature Type:gene_model
Chromosome:Gm16
Start:6803722
stop:6806427
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.16G068500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G40570.1AT Surfeit locus protein 2 (SURF2) JGI N/AIEA
PTHR16422Panther JGI N/AIEA
PTHR16422:SF3Panther JGI N/AIEA
PF05477PFAM Surfeit locus protein 2 (SURF2) JGI N/AIEA

Expression Patterns of Glyma.16G068500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.16G068500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.16g068500 Wm82.a4.v1ISS As supplied by JGI
Glyma16g07410 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.16G068500
>Glyma.16g068500.1 sequence-type=CDS polypeptide=Glyma.16g068500.1.p locus=Glyma.16g068500 ID=Glyma.16g068500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGAACAAGAGGATGGCTACGACGGGGAAGAAGGAAGGGAACAACTTGCTAGGGTTGCCGAATTTCACAGAATTAGGAAACGGGCGTTTCAAGTGCTTAGAAACAGGGCACGAGGTCCTCTCGAAGGACATAGCGTCCTACTCGCACAGCAAAAAATGCCGTTTGGGTCTCATCGATTTCGCCTTGTCCAATAACAAACCCCCTCTCAACATGTTCAAACAACACCCTCTCTGCCGTTCAAAGTTGATATGTAAGCTGACTGGAGACAATGTCAATAAGTCAGAGGAACATATCTGGAAGCATATGAGTGGGAAAAGGTTTCTCAATAAATTAGAGCAAGAGGAAGAAGAAAAGTTGTTGTGTCATGGATTGGAAGGTGAAGAGAGCTTACATGAGTCAAAAAGTGCAGATGGTGGAAAAAAGGATAGAATGAAGAAGAAGAAGAAGAAAAAGAATAGGGTCAAGGAAATTGATGAGGAGAAATTGCAGGTGTCAAAAAGTGCAGATGGTGCAAAAAAAGATAGAATGAAGAAGGAAAATAATAAGGACAAGGGAATTGAGGAGGTTATATCTGAAGTTAGGAAGTCTTCCAATGAGAACAGTGACACTGAAGACGAAGACTTCTGGATGCCTCCTGCTGGTGATCGTTGGGACAATGATGATGGTGGCGATAGATGGGGTTCAGAGTCAGAGCAGGGAACTGAAGAGGGAGATGTAATTGATGGTGATGCTGCTGAGGATTGCAAGGAGTCAGACGAGTTGTCATCAAGGACGAAAAGAATGTCGATAGAAATTGGACCAAGCAGCTTTGCTACAAGAAAAAAGAAAAGTAAGAAGAACCACCAAACTTAG
Predicted protein sequences of Glyma.16G068500
>Glyma.16g068500.1.p sequence-type=predicted peptide transcript=Glyma.16g068500.1 locus=Glyma.16g068500 ID=Glyma.16g068500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVNKRMATTGKKEGNNLLGLPNFTELGNGRFKCLETGHEVLSKDIASYSHSKKCRLGLIDFALSNNKPPLNMFKQHPLCRSKLICKLTGDNVNKSEEHIWKHMSGKRFLNKLEQEEEEKLLCHGLEGEESLHESKSADGGKKDRMKKKKKKKNRVKEIDEEKLQVSKSADGAKKDRMKKENNKDKGIEEVISEVRKSSNENSDTEDEDFWMPPAGDRWDNDDGGDRWGSESEQGTEEGDVIDGDAAEDCKESDELSSRTKRMSIEIGPSSFATRKKKSKKNHQT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo