Report for Sequence Feature Glyma05g01460
Feature Type: gene_model
Chromosome: Gm05
Start: 960779
stop: 967307
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g01460
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G62670 AT
Annotation by Michelle Graham. TAIR10: H(+)-ATPase 11 | chr5:25159495-25164957 FORWARD LENGTH=956
SoyBase E_val: 0 ISS
GO:0006200 GO-bp
Annotation by Michelle Graham. GO Biological Process: ATP catabolic process
SoyBase N/A ISS
GO:0006754 GO-bp
Annotation by Michelle Graham. GO Biological Process: ATP biosynthetic process
SoyBase N/A ISS
GO:0006812 GO-bp
Annotation by Michelle Graham. GO Biological Process: cation transport
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0000166 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleotide binding
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0015662 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
SoyBase N/A ISS
GO:0016887 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATPase activity
SoyBase N/A ISS
GO:0046872 GO-mf
Annotation by Michelle Graham. GO Molecular Function: metal ion binding
SoyBase N/A ISS
KOG0205
KOG
Plasma membrane H+-transporting ATPase
JGI ISS
PTHR24093 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24093:SF61 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00122 PFAM
E1-E2 ATPase
JGI ISS
PF00690 PFAM
Cation transporter/ATPase, N-terminus
JGI ISS
PF00702 PFAM
haloacid dehalogenase-like hydrolase
JGI ISS
UniRef100_I1JZT5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JZT5_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9M460 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Plasma membrane H+ ATPase n=1 Tax=Prunus persica RepID=Q9M460_PRUPE
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g01460
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma05g01460
Paralog Evidence Comments
Glyma17g10420 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g01460 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g030700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g01460
Coding sequences of Glyma05g01460
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g01460.1 sequence type=CDS gene model=Glyma05g01460 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGGGACAAGTCCCAAGTTTTGGAGGCCGTGTTGAAGGAAACTGTTGATTTGGAGAACATACCCATTGAGGAGGTTCTTGAGAATCTGAGATGTGGCAGAGAAGGGCTCAGCAGTGAAGCTGCTGAGGAGAGGCTTACCATTTTTGGTCACAACAAGCTTGAAGAGAAGAAAGAGAGCAAATTTTTGAAGTTCTTGGGATTTATGTGGAATCCTCTGTCATGGGTTATGGAGGCTGCTGCTATAATGGCTATTGCGCTTGCAAATGGAGGGGGGAAGGCTCCTGATTGGCAAGACTTTGTGGGTATCATTACCTTGCTTCTCATCAATTCAACTATCAGTTTCATTGAGGAGAACAATGCTGGTAATGCCGCAGCAGCTCTCATGGCTCGGCTCGCTCCAAAAGCAAAGGTTCTTCGAGATGGTAGGTGGAATGAGCAAGATGCGGCGATCCTGGTTCCCGGTGACATAATCAGCATCAAACTTGGAGATATTATTCCTGCAGATGCTCGGCTTCTTGAAGGGGATCCTTTGAAAATTGATCAATCTGCCCTTACCGGTGAGTCACTGCCAGTGACAAAGGGTCCTGGTGATGGAGTATATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATTGCTACTGGTGTTCATACCTTCTTTGGGAAAGCTGCTCATCTTGTGGATACTACCAATCAAGTGGGACACTTTCAAAAGGTCTTGACTGCAATTGGGAACTTCTGCATATGTTCAATTGCATTAGGGATGGTTGTTGAAATTATTGTTATGTATCCCATCCAAGATCGGCCCTATCGTCCTGGAATTGATAACTTGCTTGTACTTCTCATTGGAGGAATTCCAATTGCCATGCCCACAGTTTTGTCTGTGACCATGGCCATTGGTTCTCACAGGCTATCTCAGCAGGGGGCTATCACAAAGAGGATGACAGCCATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAAACTGGGACTCTGACATTAAATAAGCTTACTGTTGACAAAAATCTTGTTGAGGTTTTTGCAAAAGGAGTGGATCCAGATACTGTTATTTTGATGGCGGCCCGAGCTTCAAGGCTTGAGAATCAAGATGCAATTGATACAGCCATAGTTGGGATGTTGGCTGATCCAAAGGAGGCACGTGCTGGCATACAAGAAGTGCATTTTCTTCCTTTCAATCCTACTGATAAGCGGACGGCATTGACTTATCTTGATCAAGATGGCAAAATGCATAGAGTAAGCAAAGGTGCACCAGAACAGATCCTGAATCTTGCACACAATAAGGCAGACATTGAACGTAGAGTTCATTCAGTGATAGACAAGTTTGCAGAGCGTGGTTTACGATCTCTTGCTGTAGCATACCAAGAAGTTCCAGATGGAAGGAAAGAGAGTGCTGGAGGCCCGTGGCAATTTATTGGCCTTTTGTCTCTCTTTGACCCACCTAGGCATGATAGTGCAGAAACAATACGGAGGGCACTAAACCTTGGAGTCAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAAACAGGTCGTCGCTTGGGAATGGGTACCAACATGTATCCTTCATCAGCTTTACTTGGGCAGGACAAGGATGAATCCATTGTTGCCTTGCCAATTGATGAACTAATAGAAAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAGTATGAGATAGTGAAACGCTTGCAAGCTAGGAAACATATTTGTGGAATGACTGGGGATGGAGTGAACGATGCACCTGCCCTCAAGAAGGCAGACATTGGTATAGCTGTTGCTGATGCTACTGATGCAGCCCGGAGTGCATCTGATATTGTTCTAACAGAACCTGGACTTAGTGTTATTATTAGTGCTGTTTTGACAAGCCGAGCCATCTTCCAGAGAATGAAAAATTATACAATTTATGCAGTATCAATTACAATTCGTATTGTGCTTGGTTTTATGTTGCTGGCTCTCATTTGGAAGTTTGACTTTCCACCCTTTATGGTGCTTATTATCGCTATCCTAAATGATGGTACTATTATGACAATTTCAAAAGATCGTGTAAAACCATCACCTCTGCCAGATAGCTGGAAGCTAGCAGAGATATTTACTACTGGAGTTGTGCTTGGAAGTTACTTGGCAATGATGACAGTTATATTCTTTTGGGCGGCATACAAAACAAACTTTTTCCCGCGAGTGTTTGGAGTCCCAAGTCTTGAAAAAACTGCTCATGATGATTACCGGAAACTTGCCTCTGCAATCTATCTTCAAGTGAGCACTATTAGTCAGGCTCTTATATTTGTAACTCGATCTCGAGGTTGGTCTTATGTTGAGCGTCCTGGTTTATTGCTGGTGTTTGCTTTTGTTGTTGCTCAACTGATTGCCACTTTGATTGCAGTATATGCCAATTGGAGCTTTGCTGCAATTGAAGGAATCGGTTGGGGTTGGGCTGGTGTTATATGGTTATATAACATCATATTCTACATCCCACTTGATATCGTTAAATTTTTAATTCGCTATGCTCTTAGCGGTAGGGCTTGGGACCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTTGGAAAGGAACAACGTGAACTTCAATGGGCACATGCACAAAGAACATTACATGGATTACAACCAGCTGACACCAAGTTCAATGAGCGTACACATGTCAGTGAACTCAATCAAATGGCCGAAGAAGCTAAAAGGAGAGCTGAAATTGCAAGGTTGAGAGAACTTCATACACTAAAAGGTCACGTAGAATCAGTTGTGAGATTGAAGGGGCTTGACATAGACACAATTCAGCAAGCATACACACTCTAA
Predicted protein sequences of Glyma05g01460
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g01460.1 sequence type=predicted peptide gene model=Glyma05g01460 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGDKSQVLEAVLKETVDLENIPIEEVLENLRCGREGLSSEAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKAPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMVVEIIVMYPIQDRPYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDPDTVILMAARASRLENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYLDQDGKMHRVSKGAPEQILNLAHNKADIERRVHSVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTNFFPRVFGVPSLEKTAHDDYRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVFAFVVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDIVKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPADTKFNERTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTL*
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