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Report for Sequence Feature Glyma15g14371

Feature Type:gene_model
Chromosome:Gm15
Start:10844191
stop:10848519
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G30650AT Annotation by Michelle Graham. TAIR10: WRKY DNA-binding protein 14 | chr1:10868612-10870973 FORWARD LENGTH=430 SoyBaseE_val: 3.00E-85ISS
GO:0006355GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent SoyBaseN/AISS
GO:0010413GO-bp Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process SoyBaseN/AISS
GO:0045492GO-bp Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003700GO-mf Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity SoyBaseN/AISS
GO:0043565GO-mf Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding SoyBaseN/AISS
PF03106PFAM WRKY DNA -binding domain JGI ISS
UniRef100_G3FF80UniRef Annotation by Michelle Graham. Most informative UniRef hit: WRKY transcription factor 14-1 (Fragment) n=1 Tax=Dimocarpus longan RepID=G3FF80_9ROSI SoyBaseE_val: 3.00E-141ISS
UniRef100_UPI000233AEDEUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233AEDE related cluster n=1 Tax=unknown RepID=UPI000233AEDE SoyBaseE_val: 0ISS

LocusGene SymbolProtein Name
WRKY150 WRKY Transcription Factor

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

ParalogEvidenceComments
Glyma09g03451 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding NameAnnotation VersionEvidenceComments
Glyma.15g135600 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma15g14371.2   sequence type=transcript   gene model=Glyma15g14371   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTTTGTTTGTTATTGAAGAGGAACAATCAGTTTCAACCCCCCAAAAACCTGTTCCTTAATTTGCTTTTTCTTGCTTCTTAACAGCCAAATCCAGGAGAAAGCCTTTCTTCTCACACCCCCTTCTTAATTATCTCTAGCTAGCACCAAACAAATAAAATTCCCGCAACATTTGCATGTCTCTCATCATATCTTTCTCTAATTATATTGTTGTCTCAAGCTCCAACATCCATCATCTATGCTAGTTTCAAAACATGTCACACACACACGCCCTTCTTCCTTGCATAACATCAACAAGCTCAAGCTCTTGTTCTTGTTCTTGTTCTTCCACTAATAACTAGGAAAAGAAAAAGCATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGACTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGCACTTCATCATCTGATCAATTACCTACTACATCTCATCATCTTCATCATCATTCCTCTCACACCACCCTCTCTCATAATGATCACTGGCACCACCAACACTTCTCTTCTTCTTCTTCTTCTGATCCCATCACTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCGGTGCTAATTCAAGACCCTATGAGAGGAGCCACAAACTTTGGTGATCCTTTCTCAATCATGAGAGATCCCTTCCTTCAGGTGCTTGACATGCCTTCTTCAGCTTCTGCCTACTTCACTGGTGGCTTGGAATTAGAAGCAGCTGCAACTTTTGGTGCTGCAGTCAATACTAATTCTAATACTGCTACTAGTTCTACTACTAATACTAATACTACTACCACTACTGTTTTTGCTGCTGCACACAAGATGCTTGTGGAACATGACAACAATAGCATGAGAAGGCCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAGTCTCACCCTATGATTCCACCACCACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTGTGGTTTCACCCAACATTATGCTGAATGCAAACACCTCCAAGGAGTGCCTTGTGGACACCACAGGAATGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCTAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTACAAACAGCAGACAGACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCTAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGATCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACCCCCAAAAGGGCACAGCTACAAGAACAAAGGATGAAGAAGAGAGCAACAATAATAACAATAGTGAGGGAAATGTGTCCCCAGTTATGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAGGCATCAGATTGAGATGGATGAGGGAGAGTTTAGTGATGGACTCCCTTATAAGCCTAGTTTGATGGATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTTGACCTTTTGTTCACACAGGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGTCCTTAGATCCATTTCATCTCTTTGACTGGTCAGGAGACAACAACACCAACACCAACACAAGTAGTTCATTTGAAGAACCTAATAATAAGAGAAGGTTATAACAAGACCTAGTAAAATAAAAGGCATGCAGCACCTCCCTCACAAAAGACCTTAATATTACGATGATCATGCTTTTAAGTTTTATTTGGTGGTGCAAATATCATTCAAGGTCATGTTATGCTCTTTTTTCTTATTATTTGGTTTGAAAAATCTGTCATGTGGGGGAGGGTGTGGGAGAGAGAGATTGAGATTTCCACTTTTTCTGCTTACTACTACAACTGCTGCCTTACCTTTTTTTTTTTTTTTTTCTTGTTATTTACCAGAACAGTCAAGGAGATAAAATTAGTAGAGTGAAAAAAAAAAAAGAGTGCTGGTTGATTGGAAGCAAACTCAACGAGTCCCACATTCCTTTTGGAATATTGGTGGATGGGACAGAAAGCTGAGGAACAGAAGGTTACAACAGTTAAAACAAGTACATTCACTATAGACATGACTCGAAAGCTCAGTGAGTAGATTAATGATGATAATGGGATGGGACTAGCCCTTTCATCTTTTCAAGTGGGAAAAATTATTTAAAAGCTCATGTGGGGTTTTCTACACAAAGTGAAAAAATAAAAGAGAGAGATCAGAGATTTTCTTGCTGAGGTGAAATATATGAAAGAAGACAAAAGAATATATATAGGGTTATAGTTAAGTTATATATTATATTATTATCATACTATAATATAGAGCTTGACTTTTCATATCAGTCATTTCTAGGATGTGTGACGTGAGAGGGGAAAATGCATGCTTTGGTTCCTCGGCTTTCTGTTTTTTATTATCCACCAACTCATGTTCATTGTTTTGAATGAGATGAGATTACTTTATTATATGTTTCTTACACTAGTTATTAATTACATTTTGATTCTATTGTTTTATTATCATTAAAAAAATGGTCATTTATATATTCTGGGTCTTATCTGTTAGCATCGGAAGTTTTCTGTTTAGATAATAAAATCCAGCAAAACGAGGTTGGCATTTAATCATTTCCCATGTGCATGCTTGCCTATTG

>Glyma15g14371.1   sequence type=CDS   gene model=Glyma15g14371   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGACTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGCACTTCATCATCTGATCAATTACCTACTACATCTCATCATCTTCATCATCATTCCTCTCACACCACCCTCTCTCATAATGATCACTGGCACCACCAACACTTCTCTTCTTCTTCTTCTTCTGATCCCATCACTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCGGTGCTAATTCAAGACCCTATGAGAGGAGCCACAAACTTTGGTGATCCTTTCTCAATCATGAGAGATCCCTTCCTTCAGGTGCTTGACATGCCTTCTTCAGCTTCTGCCTACTTCACTGGTGGCTTGGAATTAGAAGCAGCTGCAACTTTTGGTGCTGCAGTCAATACTAATTCTAATACTGCTACTAGTTCTACTACTAATACTAATACTACTACCACTACTGTTTTTGCTGCTGCACACAAGATGCTTGTGGAACATGACAACAATAGCATGAGAAGGCCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAGTCTCACCCTATGATTCCACCACCACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTGTGGTTTCACCCAACATTATGCTGAATGCAAACACCTCCAAGGAGTGCCTTGTGGACACCACAGGAATGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCTAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTACAAACAGCAGACAGACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCTAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGATCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACCCCCAAAAGGGCACAGCTACAAGAACAAAGGATGAAGAAGAGAGCAACAATAATAACAATAGTGAGGGAAATGTGTCCCCAGTTATGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAGGCATCAGATTGAGATGGATGAGGGAGAGTTTAGTGATGGACTCCCTTATAAGCCTAGTTTGATGGATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTTGACCTTTTGTTCACACAGGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGTCCTTAGATCCATTTCATCTCTTTGACTGGTCAGGAGACAACAACACCAACACCAACACAAGTAGTTCATTTGAAGAACCTAATAATAAGAGAAGGTTATAA

>Glyma15g14371.2   sequence type=CDS   gene model=Glyma15g14371   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGACTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGCACTTCATCATCTGATCAATTACCTACTACATCTCATCATCTTCATCATCATTCCTCTCACACCACCCTCTCTCATAATGATCACTGGCACCACCAACACTTCTCTTCTTCTTCTTCTTCTGATCCCATCACTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCGGTGCTAATTCAAGACCCTATGAGAGGAGCCACAAACTTTGGTGATCCTTTCTCAATCATGAGAGATCCCTTCCTTCAGGTGCTTGACATGCCTTCTTCAGCTTCTGCCTACTTCACTGGTGGCTTGGAATTAGAAGCAGCTGCAACTTTTGGTGCTGCAGTCAATACTAATTCTAATACTGCTACTAGTTCTACTACTAATACTAATACTACTACCACTACTGTTTTTGCTGCTGCACACAAGATGCTTGTGGAACATGACAACAATAGCATGAGAAGGCCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAGTCTCACCCTATGATTCCACCACCACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTGTGGTTTCACCCAACATTATGCTGAATGCAAACACCTCCAAGGAGTGCCTTGTGGACACCACAGGAATGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCTAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTACAAACAGCAGACAGACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCTAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGATCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACCCCCAAAAGGGCACAGCTACAAGAACAAAGGATGAAGAAGAGAGCAACAATAATAACAATAGTGAGGGAAATGTGTCCCCAGTTATGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAGGCATCAGATTGAGATGGATGAGGGAGAGTTTAGTGATGGACTCCCTTATAAGCCTAGTTTGATGGATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTTGACCTTTTGTTCACACAGGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGTCCTTAGATCCATTTCATCTCTTTGACTGGTCAGGAGACAACAACACCAACACCAACACAAGTAGTTCATTTGAAGAACCTAATAATAAGAGAAGGTTATAA

>Glyma15g14371.1   sequence type=predicted peptide   gene model=Glyma15g14371   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCSSIFGPIIMDNYQGDLTDILRASGGAYGSTGTGTGTSSSDQLPTTSHHLHHHSSHTTLSHNDHWHHQHFSSSSSSDPITFSSSSSSSSSVLIQDPMRGATNFGDPFSIMRDPFLQVLDMPSSASAYFTGGLELEAAATFGAAVNTNSNTATSSTTNTNTTTTTVFAAAHKMLVEHDNNSMRRPCKNIFSNMIQISPNAKLPVSPYDSTTTAMAPSPRPIKPPAVVSPNIMLNANTSKECLVDTTGMQISSPRNPGLKRRKNQAKKVVCIPAPAATNSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNAASNSKNSEGSNPQKGTATRTKDEEESNNNNNSEGNVSPVMAGNSSNSVKEENMEDIERHQIEMDEGEFSDGLPYKPSLMDQSTNNQQSEDFFAELGEIEADPLDLLFTQGFGGADDQRESKSLDPFHLFDWSGDNNTNTNTSSSFEEPNNKRRL*

>Glyma15g14371.2   sequence type=predicted peptide   gene model=Glyma15g14371   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCSSIFGPIIMDNYQGDLTDILRASGGAYGSTGTGTGTSSSDQLPTTSHHLHHHSSHTTLSHNDHWHHQHFSSSSSSDPITFSSSSSSSSSVLIQDPMRGATNFGDPFSIMRDPFLQVLDMPSSASAYFTGGLELEAAATFGAAVNTNSNTATSSTTNTNTTTTTVFAAAHKMLVEHDNNSMRRPCKNIFSNMIQISPNAKLPVSPYDSTTTAMAPSPRPIKPPAVVSPNIMLNANTSKECLVDTTGMQISSPRNPGLKRRKNQAKKVVCIPAPAATNSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNAASNSKNSEGSNPQKGTATRTKDEEESNNNNNSEGNVSPVMAGNSSNSVKEENMEDIERHQIEMDEGEFSDGLPYKPSLMDQSTNNQQSEDFFAELGEIEADPLDLLFTQGFGGADDQRESKSLDPFHLFDWSGDNNTNTNTSSSFEEPNNKRRL*







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