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SCN 16-1
Parent 1:Hartwig
Parent 2:BR92-31983
Heritability:70.2
Num loci tested:1250
Percent Variation Explained:41
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
References for the QTL
Schuster et al. 2001Identification of a new major QTL associated with resistance to soybean cyst nematode (Heterodera glycines) 
Theor. Appl. Genet. 2001, 102(1):91-96

     
Maps containing SCN 16-1
MapLGStartEnd
GmComposite2003_D2 D286.2588.25See this QTL region in Sequence Browser

Loci positively associated with the QTL
Satt082Parent_1FI
Satt082Parent_2FI
Satt082HeterozygousFI
Satt082Phenotypic_R241.130001
Satt082P_value0.001000
Satt082F_value114.922997
Satt082P_GT_F0.000100
Satt082Genetic_effectsAdditive
Satt082D_to_A_ratio0.160000
Satt082Favorable_allele_sourceHartwig

Population types used in identification of the QTL
BC3F2:3

Parent trait values associated with the QTL
ParentTrait
HartwigResistant; female index 0
BR92-31983Susceptible; female index >100

Loci associated with the QTL
Satt082

Methods used to identify the QTL
Bulk segregant analysis

Comments about the QTL
Other loci linked to QTL are OPY-07_2030, OPR-07_548, Sat_001, OPAA-11_795, OPAE-08_837, Satt574, and Satt301
Parent_1 is Hartwig, Parent_2 is BR92-31983
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. Study done by analysis of variance at locus; for purposes of display this was converted to an interval around that locus.






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