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SCN 37-4
Parent 1:Magellan
Parent 2:PI 567516C
Heritability:0.55
Num loci tested:252
Interval length:18.55
Interval LOD score:4.3
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
Other related QTL's
SCN37-1
SCN37-2
SCN37-3

References for the QTL
Vuong et al. 2010Novel quantitative trait loci for broad-based resistance to soybean cyst nematode (Heterodera glycines Ichinohe) in soybean PI 567516C 
Theor. Appl. Genet. 2010, 121(7):1253-1266

     
Maps containing SCN 37-4
MapLGStartEnd
GmComposite2003_A2 A2100.08118.63See this QTL region in Sequence Browser

Loci positively associated with the QTL
Satt233Phenotypic_R2700.00%
Satt233Parent_188.4 FI
Satt233Parent_26.4 FI
Satt233Favorable_allele_sourcePI 567516C

Population types used in identification of the QTL
F2:3 RIL

Parent trait values associated with the QTL
ParentTrait
MagellanSCN susceptible
PI 567516CSCN resistant

Loci associated with the QTL
Satt233
Sat_040

Methods used to identify the QTL
JoinMap 3.0
MapQTL 5.0
CIM

Comments about the QTL
Parent_1 is Magellan, Parent_2 is PI 567516C
Publication used Female Index (FI) to quantify SCN resistance. Calculated as (# of female SCN on an individual/Avg # female SCN on susceptible cv. "Hutcheson")x100
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. QTL associated with resistance to SCN Type 1.2.5.7
Individual LOD and R2 were given for more than one HG Type. Only the first listed is presented in SoyBase; see publication for additional details






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