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SCN 39-5
Parent 1:PI437654
Parent 2:Essex
Heritability:0.731
Num loci tested:273
Interval length:8
Trait name:Reaction to Heterodera glycines

SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
SCN 39-1
SCN 39-2
SCN 39-3
SCN 39-4
SCN 39-6
SCN 39-7
SCN 39-8
SCN 39-9
SCN 39-10
SCN 39-11
SCN 39-12

S16-5

Wu et al. 2009QTL, additive and epistatic effects for SCN resistance in PI 437654 
Theor. Appl. Genet. 2009, 118(6):1093-1105

     
MapLGStartEnd
GmComposite2003_K K44.4352.43See this QTL region in Sequence Browser

Satt552Parent_10.3 FI
Satt552Parent_2136.0 FI
Satt552Phenotypic_R21
Satt552P_value0.000001
Satt552Additive_effect5.6

F7:9 RIL

ParentTrait
PI437654SCN resistant
EssexSCN susceptible

Satt552

GeneMapper 3.7
JoinMap 3.0
QTLNetwork
CIM

Parent_1 is PI437654, Parent_2 is Essex
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. QTL is associated with resistance to SCN Race 1
Publication used Female Index (FI) to quantify SCN resistance, where FI=(no. of cysts on individual/average no. of cysts on cv. Hutcheson)x100
The markers (Satt552, LG K; Satt499, LG A1) reported to flank this QTL are located on two different SoyBase Composite genetic maps. The QTL position shown is an interval around the marker on the genetic map identified by name by the authors as the location of the QTL. See the publication for additional details






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