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SCN 7-1
Parent 1:Evans
Parent 2:PI209332
Interval length:10
Interval LOD score:10.35
Percent Variation Explained:51.4
Trait name:Reaction to Heterodera glycines

Controlled vocabulary terms associated with the QTL
SourceAccession Number
Plant Trait OntologyTO:0000384
Gene OntologyGO:0009624

     
References for the QTL
Concibido et al. 1996Targeted comparative genome analysis and qualitative mapping of a major partial-resistance gene to the soybean cyst nematode. 
Theor. Appl. Genet. 1996, 93(1-2):234-241

     
Genes associated with the QTL
Rhg1

Maps containing SCN 7-1
MapLGStartEnd
GmComposite2003_G G1.808.56See this QTL region in Sequence Browser

Population types used in identification of the QTL
F5:6 RIL

Parent trait values associated with the QTL
ParentTrait
EvansSusceptible
PI209332Resistant to race 3

Loci associated with the QTL
Bng122_1
C006_1

Gene associated with the QTL
Rhg1

Methods used to identify the QTL
Interval analysis

Comments about the QTL
The trait is resistance to Soybean Cyst Nematode ( SCN ) disease which is caused by the nematode Heterodera glycines. A Candidate_gene maps within 10 cM of the QTL. A Putative_candidate_gene is linked to the QTL, but more than 10 cM from it.






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