Seed coat color 1-1
| Parent 1: | Kitakomachi |
| Parent 2: | Koganejiro |
| Num loci tested: | 491 |
| Interval length: | 13 |
| Interval LOD score: | 3.8 |
| Trait name: | Seed coat color |
Controlled vocabulary terms associated with the QTL
Open in new tab Close
Other related QTL's
Other names for the QTL
References for the QTL
Open in new tab Close
Maps containing Seed coat color 1-1
Loci positively associated with the QTL
| Satt333 | Parent_1 | 3.79 API |
| Satt333 | Parent_2 | 0.59 API |
| Satt333 | Phenotypic_R2 | 12.3 |
| Satt333 | Favorable_allele_source | Kitakomachi |
| Satt333 | Additive_effect | -0.48 |
| Satt333 | Dominance_effect | -0.8 |
Population types used in identification of the QTL
Parent trait values associated with the QTL
| Parent | Trait |
|---|
| Kitakomachi | Severe pigmentation from chilling |
| Koganejiro | Slight pigmentation from chilling |
Other QTLs studied
Loci associated with the QTL
Methods used to identify the QTL
| MapMaker/EXP 3.0 |
| QTL Cartographer 2.0 |
| CIM |
Comments about the QTL
| Location approximate: original marker (e1m54-6) is not found in SoyBase. QTL limited to an interval at the nearest marker. See publication for additional details. |
| Parent 1 is Kitakomachi, Parent 2 is Koganejiro |
| Publication used Average Pigmentation Index (API) that used the average pigmentation (0=no pigment to 4=heavy pigmented) of the seeds from flowers that were exposed 5-8 days after opening to chilling (15 degrees C, or 59 degrees F) |
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA |
| |
|
|
|
|
SoyBase
Follow us on Twitter @SoyBaseDatabase
