Seed coat color 1-2
| Parent 1: | Kitakomachi |
| Parent 2: | Koganejiro |
| Num loci tested: | 491 |
| Interval length: | 13.3 |
| Interval LOD score: | 4.7 |
| Trait name: | Seed coat color |
Controlled vocabulary terms associated with the QTL
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Other related QTL's
Other names for the QTL
References for the QTL
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Maps containing Seed coat color 1-2
Loci positively associated with the QTL
| A089_2 | Parent_1 | 3.79 API |
| A089_2 | Parent_2 | 0.59 API |
| A089_2 | Phenotypic_R2 | 25.7 |
| A089_2 | Favorable_allele_source | Kitakomachi |
| A089_2 | Additive_effect | -0.62 |
| A089_2 | Dominance_effect | 1.33 |
Population types used in identification of the QTL
Parent trait values associated with the QTL
| Parent | Trait |
|---|
| Kitakomachi | Severe pigmentation from chilling |
| Koganejiro | Slight pigmentation from chilling |
Other QTLs studied
Loci associated with the QTL
Methods used to identify the QTL
| MapMaker/EXP 3.0 |
| QTL Cartographer 2.0 |
| CIM |
Comments about the QTL
| Location approximate: original marker (e3m19-11) is not found in SoyBase. QTL limited to an interval at the nearest marker. See publication for additional details. |
| Parent 1 is Kitakomachi, Parent 2 is Koganejiro |
| Publication used Average Pigmentation Index (API) that used the average pigmentation (0=no pigment to 4=heavy pigmented) of the seeds from flowers that were exposed 5-8 days after opening to chilling (15 degrees C, or 59 degrees F) |
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA |
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