Seed coat color 1-3
| Parent 1: | Kitakomachi |
| Parent 2: | Koganejiro |
| Num loci tested: | 491 |
| Interval length: | 2 |
| Interval LOD score: | 7.01 |
| Trait name: | Seed coat color |
Controlled vocabulary terms associated with the QTL
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Other related QTL's
Other names for the QTL
References for the QTL
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Maps containing Seed coat color 1-3
Loci positively associated with the QTL
| Satt100 | Parent_1 | 3.79 API |
| Satt100 | Parent_2 | 0.59 API |
| Satt100 | Phenotypic_R2 | 36.7 |
| Satt100 | Favorable_allele_source | Koganejiro |
| Satt100 | Additive_effect | 1.19 |
| Satt100 | Dominance_effect | -0.14 |
Population types used in identification of the QTL
Parent trait values associated with the QTL
| Parent | Trait |
|---|
| Kitakomachi | Severe pigmentation from chilling |
| Koganejiro | Slight pigmentation from chilling |
Other QTLs studied
Loci associated with the QTL
Methods used to identify the QTL
| MapMaker/EXP 3.0 |
| QTL Cartographer 2.0 |
| CIM |
Comments about the QTL
| Parent 1 is Kitakomachi, Parent 2 is Koganejiro |
| Publication used Average Pigmentation Index (API) that used the average pigmentation (0=no pigment to 4=heavy pigmented) of the seeds from flowers that were exposed 5-8 days after opening to chilling (15 degrees C, or 59 degrees F) |
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA |
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