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GWAS Report for Al tolerance 1
Experimental Details
Number of germplasm analyzed | 188 |
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Number of loci tested | 834 |
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Platform name | SSR/Gel |
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Publication for This Experiment
Association mapping combined with linkage analysis for aluminum tolerance among soybean cultivars released in Yellow and Changjiang River Valleys in China
(Korir et al. 2013a)
Theor Appl Genet 2013, 126:16591675
10.1007/s00122-013-2082-0
Controlled vocabulary terms associated with the QTL Family
GWAS QTL
The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.
GWAS QTL name | Associated locus | R2 | Chromosome | Linkage Group |
Al tolerance 1-g1 | Satt209 | 0.145 | Gm08 | A2 |
Al tolerance 1-g2 | Sat_364 | 0.082 | Gm11 | B1 |
Al tolerance 1-g3 | Satt286 | 0.052 | Gm06 | C2 |
Al tolerance 1-g4 | Satt005 | 0.086 | Gm02 | D1b |
Al tolerance 1-g6 | Sat_240 | 0.085 | Gm13 | F |
Al tolerance 1-g7 | Sat_174 | 0.067 | Gm20 | I |
Al tolerance 1-g8 | GMES0069 | 0.052 | Gm16 | J |
Al tolerance 1-g9 | Sct_190 | 0.043 | Gm09 | K |
Al tolerance 1-g10 | Satt284 | 0.077 | Gm19 | L |
Al tolerance 1-g11 | GMES1703 | 0.059 | Gm10 | O |
Click Here to View Full List of GWAS QTL