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GWAS Report for Canopy cover 1
Experimental Details
Number of germplasm analyzed | 5555 |
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Number of loci tested | 4077 |
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Platform name | SoyNAM |
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Platform details | Illumina BeadChip |
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Publication for This Experiment
Genetic Architecture of Phenomic-Enabled Canopy Coverage in Glycine max
(Xavier et al. 2017a)
Genetics 2017, 206(2):1081-1089
10.1534/genetics.116.198713
Controlled vocabulary terms associated with the QTL Family
GWAS QTL
The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.
GWAS QTL name | Associated locus | Chromosome | Linkage Group |
Canopy cover 1-g1 | ss1235974195 | Gm01 | D1a |
Canopy cover 1-g2 | ss1235977049 | Gm05 | A1 |
Canopy cover 1-g3 | ss1235977888 | Gm06 | C2 |
Canopy cover 1-g4 | ss1235980152 | Gm09 | K |
Canopy cover 1-g5 | ss1235980760 | Gm10 | O |
Canopy cover 1-g6 | ss1235980842 | Gm10 | O |
Canopy cover 1-g7 | ss1235985891 | Gm19 | L |
Click Here to View Full List of GWAS QTL