Click Here to View Full List of GWAS QTL
GWAS Report for Drought tolerance 1
Experimental Details
| Number of germplasm analyzed | 152 |
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| Number of loci tested | 2111 |
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| Platform name | Axiom SoyaSNP |
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| Platform details | 180K Axiom SoyaSNP |
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Publication for This Experiment
Quantitative trait loci mapping for flooding tolerance at an early growth stage of soybean recombinant inbred line population
(Dhungana et al. 2020)
Dhungana et al. Plant Breeding (2020) 139:626-638
10.1111/pbr.12790
Controlled vocabulary terms associated with the QTL Family
GWAS QTL
The GWAS QTL can be shown in either the SoyBase CMap Genetic Map Viewer (where it can be compared to the other GWAS and biparental QTL) or in the SoyBase GBrowse Genome Viewer (where it can be compared to the genes in that chromosomal region). When a candidate gene has been identified clicking on the gene name ('Glyma') opens the SoyBase Gene Report page for that gene.
| GWAS QTL name | Original name | LOD | Chromosome | Linkage Group |
| Drought tolerance 1-g1 | qSFT_9-22-CCF | 3.7 | Gm09 | K |
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| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g2 | qSFT_10-35-DWI | 5.01 | Gm10 | O |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g3 | qSFT_10-35-FTI | 3.36 | Gm10 | O |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g4 | qSFT_10-35-DWC | 5.15 | Gm10 | O |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g5 | qSFT_10-46-DWI | 4.89 | Gm10 | O |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g6 | qSFT_10-46-FTI | 3.92 | Gm10 | O |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g7 | qSFT_10-46-DWC | 3.79 | Gm10 | O |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g8 | qSFT_12-8-CCC | 10.36 | Gm12 | H |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g9 | qSFT_12-8-CCF | 7.47 | Gm12 | H |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g10 | qSFT_12-12-CCC | 13.65 | Gm12 | H |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g11 | qSFT_12-12-CCF | 6.31 | Gm12 | H |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g12 | qSFT_13-24-DWC | 3.73 | Gm13 | F |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g13 | qSFT_13-30-FTI | 3.7 | Gm13 | F |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g14 | qSFT_13-35-DWC | 4.68 | Gm13 | F |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g15 | qSFT_13-35_DWI | 4.58 | Gm13 | F |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g16 | qSFT_17-52-CCF | 5.28 | Gm17 | D2 |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
| Drought tolerance 1-g17 | qSFT_17-91-CCC | 3.59 | Gm17 | D2 |
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|
| QTL is a composite of two years. See paper for individual year QTLs |
Click Here to View Full List of GWAS QTL
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