Report for Sequence Feature Glyma.17g118600
Feature Type: gene_model
Chromosome: Gm17
Start: 9384137
stop: 9388911
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.17g118600
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G52730.1 AT
Transducin/WD40 repeat-like superfamily protein
JGI N/A IEA
AT3G15610.1 AT
Transducin/WD40 repeat-like superfamily protein
JGI N/A IEA
GO:0005515 GO-mf
protein binding
EnsemblGenomes N/A IEA
GO:0005515 GO-mf
protein binding
JGI N/A IEA
KOG0278
KOG
Serine/threonine kinase receptor-associated protein
JGI N/A IEA
PTHR19877 Panther
WD40 REPEAT PROTEIN
JGI N/A IEA
PF00400 PFAM
WD domain, G-beta repeat
JGI N/A IEA
Expression Patterns of Glyma.17g118600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.17g118600
Paralog Evidence Comments
Glyma.05g010900 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.17g118600 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma17g12770 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.17g118600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.17g118600.2 sequence-type=transcript locus=Glyma.17g118600 ID=Glyma.17g118600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGATCCAAATGACTGCGTAAGAAGAAAACTGAGATTGGCTACGTGTAGGTGTTTGGAGTGGGGTCCACAATCCACCATCTCCATCCATTCCATCCGAGAAACCATAGACACAGTAGAAAAGGCCAGATCCAAACCCAACGTAACCTCGCTTCGTGCCTATCCTCCACCCTCACCCTCACCCTTTCCTCCTCTCCATCTTTACCCattttattttataatattatatacatcacattattttctcttcttttctttccttttTACCATTTTCAGTTCACAGGGTTAGGTCTTGCTCCCTTGTCTGGTCTGGTGTGCAATTCCCATACCAATAACAATACACCCATTTTACCATTCAATATACCTATAGTCATCCTCTCCTTCGTTCTGAAAATCGTAGATTTTTGTTTTAGGGTTTCTCTTATATAATCTTTTCGTAACACAAAAAAAAATCACATAAATCTTCCTTTATATTTATTACTATTTCGTTTTTTCTTTGGATTAATTAACTAGGCTTGAGCTATCCGAATAATAATAATAATAGTTTCGGAGAATGGAAAAGAAAAAGGTAGCAGTTCCCCTCGTGTGCCACGGACACTCTCGCCCCGTGGTTGATCTCTTCTACAGTCCCGTTACGCCCGATGGGTTTTTCCTCATCAGTGCCAGCAAGGATTCTAGTCCTATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTGTGGAGTTGCTGCTTGGATACCAGTGCCTTACGTGCTGCAACTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCTTTGACTGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGCTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTACTTACTGGGGGAGTTGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCTCCTGGTTCTGTCAGAACTGTTGCCTGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACACTGGAAACCAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATAACAACTGCTGATGGTTCTACTGTAAAGTTTTGGGATGCAAATTAGTAAGTACCAAGCCGTGTTGGTCTATCTCTTTACCCAAATTTGTTTGTATGATTTATCAATCTTCGTTACCTTTGTTTTCCAGCTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTATCGAATCAGTTTCTCTGGAACCTAAGTATGGGAACAAGTTTGTTGCCGGGGGAGAAGATATGTGGGTTCACGTGTTTGATTTCCATACAGGGAATGAGATTGCATGCAACAAGGGGCACCATGGTCCTGTCCACTGTGTTCGTTTTTCTCCTGGTGGAGAATCCTATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACTGGCCCCTTGACCCTGGATGGCTCGGAGACTGTGTCTGCAAATGGTTCAGTTGATAAGGTGAAGGTTACTGCAGATGAGGTTTCGCATAAGATTGAGGGTTTTCAAATTGCAGATGAAGGGAAATCTAAAGAAAAAGACGAGGCTGTGGAGGAATCAAGCTAATAGTCGTGCATTTTGTCTGGCAGAGTGTTAGAATTAACTAGATCAAGTGCCTTATGTACGTGATTAGTAAACTAAATTTTGTAAATTTTAGTTTGTGTTTGAGATTTTACTGAATTGAACGAGCTTGTTGCAGCTGGCTGAAATAAGTTCTGTTTGCTTTTATTTCAATTCTGACATGGGAGTTTATGGAATATAGGTAATGACTTGGTATACTTGTTCAAGAATCATGGCCACTAAAACGGCTTTAATCTATAGATTCTGGCCAGTTTAATTTTGGCCGGGACTTGCGCTCTAGTATATCTTTTTCTTGGTTACATTCTAATGCTATCTAGTATTTGAAGT
>Glyma.17g118600.3 sequence-type=transcript locus=Glyma.17g118600 ID=Glyma.17g118600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGATCCAAATGACTGCGTAAGAAGAAAACTGAGATTGGCTACGTGTAGGTGTTTGGAGTGGGGTCCACAATCCACCATCTCCATCCATTCCATCCGAGAAACCATAGACACAGTAGAAAAGGCCAGATCCAAACCCAACGTAACCTCGCTTCGTGCCTATCCTCCACCCTCACCCTCACCCTTTCCTCCTCTCCATCTTTACCCattttattttataatattatatacatcacattattttctcttcttttctttccttttTACCATTTTCAGTTCACAGGGTTAGGTCTTGCTCCCTTGTCTGGTCTGGTGTGCAATTCCCATACCAATAACAATACACCCATTTTACCATTCAATATACCTATAGTCATCCTCTCCTTCGTTCTGAAAATCGTAGATTTTTGTTTTAGGGTTTCTCTTATATAATCTTTTCGTAACACAAAAAAAAATCACATAAATCTTCCTTTATATTTATTACTATTTCGTTTTTTCTTTGGATTAATTAACTAGGCTTGAGCTATCCGAATAATAATAATAATAGTTTCGGAGAATGGAAAAGAAAAAGGTAGCAGTTCCCCTCGTGTGCCACGGACACTCTCGCCCCGTGGTTGATCTCTTCTACAGTCCCGTTACGCCCGATGGGTTTTTCCTCATCAGTGCCAGCAAGGATTCTAGTCCTATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTGTGGAGTTGCTGCTTGGATACCAGTGCCTTACGTGCTGCAACTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCTTTGACTGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGCTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTACTTACTGGGGGAGTTGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCTCCTGGTTCTGTCAGAACTGTTGCCTGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACACTGGAAACCAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATAACAACTGCTGATGGTTCTACTGTAAAGTTTTGGGATGCAAATTACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTATCGAATCAGTTTCTCTGGAACCTAAGTATGGGAACAAGTTTGTTGCCGGGGGAGAAGATATGTGGGTTCACGTGTTTGATTTCCATACAGGGAATGAGATTGGTAAGCTATTGGGCCCATTAGTTTTTGATGTTGTACTGTGCTTGTATATGTTTTGATGATCTATCTGTGTGGCAGCATGCAACAAGGGGCACCATGGTCCTGTCCACTGTGTTCGTTTTTCTCCTGGTGGAGAATCCTATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACTGGCCCCTTGACCCTGGATGGCTCGGAGACTGTGTCTGCAAATGGTTCAGTTGATAAGGTGAAGGTTACTGCAGATGAGGTTTCGCATAAGATTGAGGGTTTTCAAATTGCAGATGAAGGGAAATCTAAAGAAAAAGACGAGGCTGTGGAGGAATCAAGCTAATAGTCGTGCATTTTGTCTGGCAGAGTGTTAGAATTAACTAGATCAAGTGCCTTATGTACGTGATTAGTAAACTAAATTTTGTAAATTTTAGTTTGTGTTTGAGATTTTACTGAATTGAACGAGCTTGTTGCAGCTGGCTGAAATAAGTTCTGTTTGCTTTTATTTCAATTCTGACATGGGAGTTTATGGAATATAGGTAATGACTTGGTATACTTGTTCAAGAATCATGGCCACTAAAACGGCTTTAATCTATAGATTCTGGCCAGTTTAATTTTGGCCGGGACTTGCGCTCTAGTATATCTTTTTCTTGGTTACATTCTAATGCTATCTAGTATTTGAAGT
Coding sequences of Glyma.17g118600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.17g118600.1 sequence-type=CDS polypeptide=Glyma.17g118600.1.p locus=Glyma.17g118600 ID=Glyma.17g118600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAAGAAAAAGGTAGCAGTTCCCCTCGTGTGCCACGGACACTCTCGCCCCGTGGTTGATCTCTTCTACAGTCCCGTTACGCCCGATGGGTTTTTCCTCATCAGTGCCAGCAAGGATTCTAGTCCTATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTGTGGAGTTGCTGCTTGGATACCAGTGCCTTACGTGCTGCAACTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCTTTGACTGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGCTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTACTTACTGGGGGAGTTGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCTCCTGGTTCTGTCAGAACTGTTGCCTGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACACTGGAAACCAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATAACAACTGCTGATGGTTCTACTGTAAAGTTTTGGGATGCAAATTACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTATCGAATCAGTTTCTCTGGAACCTAAGTATGGGAACAAGTTTGTTGCCGGGGGAGAAGATATGTGGGTTCACGTGTTTGATTTCCATACAGGGAATGAGATTGCATGCAACAAGGGGCACCATGGTCCTGTCCACTGTGTTCGTTTTTCTCCTGGTGGAGAATCCTATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACTGGCCCCTTGACCCTGGATGGCTCGGAGACTGTGTCTGCAAATGGTTCAGTTGATAAGGTGAAGGTTACTGCAGATGAGGTTTCGCATAAGATTGAGGGTTTTCAAATTGCAGATGAAGGGAAATCTAAAGAAAAAGACGAGGCTGTGGAGGAATCAAGCTAA
>Glyma.17g118600.2 sequence-type=CDS polypeptide=Glyma.17g118600.2.p locus=Glyma.17g118600 ID=Glyma.17g118600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAAGAAAAAGGTAGCAGTTCCCCTCGTGTGCCACGGACACTCTCGCCCCGTGGTTGATCTCTTCTACAGTCCCGTTACGCCCGATGGGTTTTTCCTCATCAGTGCCAGCAAGGATTCTAGTCCTATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTGTGGAGTTGCTGCTTGGATACCAGTGCCTTACGTGCTGCAACTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCTTTGACTGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGCTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTACTTACTGGGGGAGTTGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCTCCTGGTTCTGTCAGAACTGTTGCCTGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACACTGGAAACCAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATAACAACTGCTGATGGTTCTACTGTAAAGTTTTGGGATGCAAATTAG
>Glyma.17g118600.3 sequence-type=CDS polypeptide=Glyma.17g118600.3.p locus=Glyma.17g118600 ID=Glyma.17g118600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAAGAAAAAGGTAGCAGTTCCCCTCGTGTGCCACGGACACTCTCGCCCCGTGGTTGATCTCTTCTACAGTCCCGTTACGCCCGATGGGTTTTTCCTCATCAGTGCCAGCAAGGATTCTAGTCCTATGCTCAGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTGTGGAGTTGCTGCTTGGATACCAGTGCCTTACGTGCTGCAACTGCTTCTGCTGATTTCTCAACGAAAGTTTGGGATGCTTTGACTGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGCTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTACTTACTGGGGGAGTTGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCTCCTGGTTCTGTCAGAACTGTTGCCTGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACACTGGAAACCAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATAACAACTGCTGATGGTTCTACTGTAAAGTTTTGGGATGCAAATTACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTATCGAATCAGTTTCTCTGGAACCTAAGTATGGGAACAAGTTTGTTGCCGGGGGAGAAGATATGTGGGTTCACGTGTTTGATTTCCATACAGGGAATGAGATTGGTAAGCTATTGGGCCCATTAGTTTTTGATGTTGTACTGTGCTTGTATATGTTTTGA
Predicted protein sequences of Glyma.17g118600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.17g118600.1.p sequence-type=predicted peptide transcript=Glyma.17g118600.1 locus=Glyma.17g118600 ID=Glyma.17g118600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTSALRAATASADFSTKVWDALTGDELHSFEHKHIARACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTIESVSLEPKYGNKFVAGGEDMWVHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTLDGSETVSANGSVDKVKVTADEVSHKIEGFQIADEGKSKEKDEAVEESS*
>Glyma.17g118600.2.p sequence-type=predicted peptide transcript=Glyma.17g118600.2 locus=Glyma.17g118600 ID=Glyma.17g118600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTSALRAATASADFSTKVWDALTGDELHSFEHKHIARACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDAN*
>Glyma.17g118600.3.p sequence-type=predicted peptide transcript=Glyma.17g118600.3 locus=Glyma.17g118600 ID=Glyma.17g118600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTSALRAATASADFSTKVWDALTGDELHSFEHKHIARACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTIESVSLEPKYGNKFVAGGEDMWVHVFDFHTGNEIGKLLGPLVFDVVLCLYMF*