Report for Sequence Feature Glyma03g09050
Feature Type: gene_model
Chromosome: Gm03
Start: 10373779
stop: 10375240
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g09050
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G09020 AT
Annotation by Michelle Graham. TAIR10: alpha 1,4-glycosyltransferase family protein | chr3:2753307-2754542 FORWARD LENGTH=411
SoyBase E_val: 2.00E-90 ISS
GO:0000165 GO-bp
Annotation by Michelle Graham. GO Biological Process: MAPK cascade
SoyBase N/A ISS
GO:0002679 GO-bp
Annotation by Michelle Graham. GO Biological Process: respiratory burst involved in defense response
SoyBase N/A ISS
GO:0006612 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane
SoyBase N/A ISS
GO:0009595 GO-bp
Annotation by Michelle Graham. GO Biological Process: detection of biotic stimulus
SoyBase N/A ISS
GO:0009697 GO-bp
Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process
SoyBase N/A ISS
GO:0009862 GO-bp
Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway
SoyBase N/A ISS
GO:0009867 GO-bp
Annotation by Michelle Graham. GO Biological Process: jasmonic acid mediated signaling pathway
SoyBase N/A ISS
GO:0010200 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to chitin
SoyBase N/A ISS
GO:0010310 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of hydrogen peroxide metabolic process
SoyBase N/A ISS
GO:0010363 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response
SoyBase N/A ISS
GO:0031348 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response
SoyBase N/A ISS
GO:0035556 GO-bp
Annotation by Michelle Graham. GO Biological Process: intracellular signal transduction
SoyBase N/A ISS
GO:0042742 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to bacterium
SoyBase N/A ISS
GO:0043900 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of multi-organism process
SoyBase N/A ISS
GO:0045088 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of innate immune response
SoyBase N/A ISS
GO:0050832 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus
SoyBase N/A ISS
GO:0005794 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus
SoyBase N/A ISS
GO:0008378 GO-mf
Annotation by Michelle Graham. GO Molecular Function: galactosyltransferase activity
SoyBase N/A ISS
GO:0016740 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity
SoyBase N/A ISS
GO:0016757 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups
SoyBase N/A ISS
PTHR12042 Panther
LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE (ALPHA- 1,4-GALACTOSYLTRANSFERASE)
JGI ISS
PF04488 PFAM
Glycosyltransferase sugar-binding region containing DXD motif
JGI ISS
PF04572 PFAM
Alpha 1,4-glycosyltransferase conserved region
JGI ISS
UniRef100_G7KRB0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Lactosylceramide 4-alpha-galactosyltransferase n=1 Tax=Medicago truncatula RepID=G7KRB0_MEDTR
SoyBase E_val: 6.00E-125 ISS
UniRef100_I1JLI3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1JLI3_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma03g09050
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma03g09050 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma03g09050
Coding sequences of Glyma03g09050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g09050.2 sequence type=CDS gene model=Glyma03g09050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTCTGCATAAGTTCTTTCCAATTGCAACTCTCACCAGACACAATAATCCAAAAGTTGTTTGTTCATCGGCTGCTTAAACATGCCAAGTTATCTGTCTTCCCTCTAATCACTTTCTCTGCCATAATTTTTCTTATCTATGCTGATAGTATTATCTACCATGATTCATTACACTCAGCAACTAATAAAGAAGCTACAGAGAAGTTGGAAGTTCACAATCACAGAACAAAAGAAGAAATAAGGTCAACACTTGTTCTCATACCTTTACATTCCATTCGAGAGAAGGATGAAGCTGATAGTCAAAAACAGAAGGCTCTAGTCACCCCATTAAATGTCACAGAAGAAGAAAGACAAACATGTTTATTTGGAGGGAGAGAATTGCTTCCTGTGGAAAGCATTTTCAAGAACCATCCTAAGGCATGTCTGACAATTCTATCAAGAACTTTGGACACCAAGCATGGCTACAGGATCCTGAAACCACTGCTTGATCGTAGGTTCAAAGTGCAGGCAATGGCCCCAGACTTGCCATTTTTGGTCAAGGGGACTCCGGTCGAAGCTTGGTTTCGTGAGCTAAGGAAGGGTAGAAAGGACCCCAGTGAGATTCCTTTGTCTCAGAATCTATCTAATCTGATAAGACTTGCAGTTCTGTACAAATATGGTGGTGTCTACATAGATACATACTTTATACTTTATAGTAAGCACTGGACTAGATTAAATAATGCAGTTCTGATTTTTGATATTGGACATCCACTTCGGCACAGATTCATCAATGAATTTGCCTTGACTTTCAATGGAAACAAATGGGGGAATAATGGTCCCTACCTGGTTTCCAGAGTGATTAAGAGGCTGTTTAAAAGACATGATTTCAACTTTACAATCTTGCCGCCTATGGCCTTTTATCCAGTGGATTGGAACAAGATAAAATCAAGACGGGTAGAAGCCAACCTGCTTCAGCTCAGTGGGAAGACTTATGGGATTCATCTATGGAATAAACATAGTAGCAGATTGACAATTGAAGATGGAAGTGTCATTGGAAGACTTATATCAGATTACTGTGAAACACTCTAG
Predicted protein sequences of Glyma03g09050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g09050.2 sequence type=predicted peptide gene model=Glyma03g09050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MFCISSFQLQLSPDTIIQKLFVHRLLKHAKLSVFPLITFSAIIFLIYADSIIYHDSLHSATNKEATEKLEVHNHRTKEEIRSTLVLIPLHSIREKDEADSQKQKALVTPLNVTEEERQTCLFGGRELLPVESIFKNHPKACLTILSRTLDTKHGYRILKPLLDRRFKVQAMAPDLPFLVKGTPVEAWFRELRKGRKDPSEIPLSQNLSNLIRLAVLYKYGGVYIDTYFILYSKHWTRLNNAVLIFDIGHPLRHRFINEFALTFNGNKWGNNGPYLVSRVIKRLFKRHDFNFTILPPMAFYPVDWNKIKSRRVEANLLQLSGKTYGIHLWNKHSSRLTIEDGSVIGRLISDYCETL*