Report for Sequence Feature Glyma06g21320
Feature Type: gene_model
Chromosome: Gm06
Start: 17899290
stop: 17900048
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g21320
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G25400 AT
Annotation by Michelle Graham. TAIR10: CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). | chr3:9213236-9214144 FORWARD LENGTH=141
SoyBase E_val: 1.00E-46 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PTHR14552 Panther
FAMILY NOT NAMED
JGI ISS
PF03819 PFAM
MazG nucleotide pyrophosphohydrolase domain
JGI ISS
UniRef100_B6SRV4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: MazG nucleotide pyrophosphohydrolase domain protein n=1 Tax=Zea mays RepID=B6SRV4_MAIZE
SoyBase E_val: 2.00E-45 ISS
UniRef100_C6T380 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6T380_SOYBN
SoyBase E_val: 3.00E-90 ISS
Expression Patterns of Glyma06g21320
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g21320 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g197800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g21320
Coding sequences of Glyma06g21320
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g21320.2 sequence type=CDS gene model=Glyma06g21320 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCATAGCATTTGGATGAAGCATGAGTTAGAGATAAAAACCAGAAAAGGAGATATGGATTGCTCTTATGGTTTTCCCATAACACGTCCAAGAGATGTTTCTCTTCAGGAACTAAGCAAGAGGCTGGCCGAGTTTGCTGAAGTGAGAGGATGGGATCAACATCACAGTCCTAGAAATCTTCTCTTAGCACTTGTTGGAGAGGTGGGAGAGCTGTCTGAGATATTCCAATGGAAAGGAGAAGTTGCAAAAGGATTACCCAATTGGAGTTCTGATGACAAGGAAAGGTTAGAGGAAGAACTTTCAGATGTTTTGTTGTATTTGGTGCGTCTTGCTGATGTGTGTGGCCTAGATCTTGGACAAGCAGCTCTAACAAAATTGGTCAAGAATGCTCAGAAATACCCTGTTGTTGTTACTAACAACACACCCTCTTCAACAACCATGAATTGA
Predicted protein sequences of Glyma06g21320
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g21320.2 sequence type=predicted peptide gene model=Glyma06g21320 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MHSIWMKHELEIKTRKGDMDCSYGFPITRPRDVSLQELSKRLAEFAEVRGWDQHHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPNWSSDDKERLEEELSDVLLYLVRLADVCGLDLGQAALTKLVKNAQKYPVVVTNNTPSSTTMN*