Report for Sequence Feature Glyma07g06210
Feature Type: gene_model
Chromosome: Gm07
Start: 4923256
stop: 4928500
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g06210
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G40190 AT
Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein | chr2:16785232-16787257 FORWARD LENGTH=463
SoyBase E_val: 0 ISS
GO:0006487 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein N-linked glycosylation
SoyBase N/A ISS
GO:0006970 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to osmotic stress
SoyBase N/A ISS
GO:0009058 GO-bp
Annotation by Michelle Graham. GO Biological Process: biosynthetic process
SoyBase N/A ISS
GO:0009737 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus
SoyBase N/A ISS
GO:0009832 GO-bp
Annotation by Michelle Graham. GO Biological Process: plant-type cell wall biogenesis
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0005789 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum membrane
SoyBase N/A ISS
GO:0016757 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups
SoyBase N/A ISS
KOG1387
KOG
Glycosyltransferase
JGI ISS
PTHR12526 Panther
GLYCOSYLTRANSFERASE
JGI ISS
PTHR12526:SF23 Panther
GLYCOSYL TRANSFERASE
JGI ISS
PF00534 PFAM
Glycosyl transferases group 1
JGI ISS
UniRef100_B9SQP3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Glycosyl transferase, putative n=1 Tax=Ricinus communis RepID=B9SQP3_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1KHV8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KHV8_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g06210
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma07g06210
Paralog Evidence Comments
Glyma16g02840 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g06210 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g056300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g06210
Coding sequences of Glyma07g06210
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g06210.1 sequence type=CDS gene model=Glyma07g06210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTGACGATGATCATCACTGCGCTCATCACTGCCATACTTGCGGGACTTTGCATTGGCCCAATCAACGGCAGGCGGCGGAGGAAGAGGGCCGTGGCGTTCTTCCATCCGTACACCAACGACGGTGGCGGCGGGGAGAGGGTGCTGTGGTGCGCCGTCAGAGGTATCCAGGAGGAGAGCCCCGACCTTGATTGCTACGTGTACACCGGAGATCATGACGCCACCCCTCAATCGCTCATGGCTCGTGCCCTCGATCGCTTTGGGGTCGCTCTCCTCTCTCCTCCAAAGGTGGTTCATTTGTACAAGAGAAAGTGGATAGAAGAAACTACTTATCCGCACTTTACAATGATTGGTCAAAGTCTGGGTTCTGTGTATCTTGCATGGGAGGCTTTGTGCAAGTTTACCCCAATATATTACTTTGACACAAGTGGATATGCTTTTACATATCCACTTGCTCGGTTGTTTGGATGCAAAGTTATTTGCTATACTCATTATCCTACTATCAGCTCAGACATGCTAGCTCGCGTTCGTCAGCGCAGCTTCATGTATAATAACGATGCCTTAATTACAAAAAGTGTTTGGCTTTCAAGGTGCAAAATAGTCTATTATACAGTATTCAGCTGCTTGTATGGATTTGTAGGATCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACTAAATCCCATATTGAAAATCTTTGGAGATTTCCTGACCGTATTAAGCGAGTTTATCCTCCTTGTGATACTTCAGGACTCCAGGTACTTCCCTTGGAACGATCAGCAGAAATTCCAGTATTAATATCTGTTGCACAATTTCGACCGGAGAAGGCACACACTCTCCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTAGATCCTAGCTTGCCAAAACCTAAGTTCCAAATTGTGGGTAGCTGTAGAAATAAATCAGATGAAGACAGACTTCAAATGTTAAAAGAGAAAGCAATCGAGCTGAATGTGAATGAACACATGGAATTTCATAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGCATTCATTCAATGACAGATGAGCATTTTGGCATTAGTGTGGTAGAATACATGGCTGCTGGTGCCATTCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTATTAGATGAAGAAGGACAGCAGACAGGATTTCTTGCCTGCAGTGTTGAAGAATATGCAGATGCCATGGTGAGAATTGTATCGATGCCGGAGATGGAGAGACTTAAGATGGCTGCAGCTGCAAGGAGACGGGCAGGGAGGTTTTCCGAGCAGAGGTTTTATGATGACTTCAAAGCTGCAGTGCATCCTATCCTGTGTCATATTTCTAGGTGA
Predicted protein sequences of Glyma07g06210
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g06210.1 sequence type=predicted peptide gene model=Glyma07g06210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLTMIITALITAILAGLCIGPINGRRRRKRAVAFFHPYTNDGGGGERVLWCAVRGIQEESPDLDCYVYTGDHDATPQSLMARALDRFGVALLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTPIYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQRSFMYNNDALITKSVWLSRCKIVYYTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDRIKRVYPPCDTSGLQVLPLERSAEIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPSLPKPKFQIVGSCRNKSDEDRLQMLKEKAIELNVNEHMEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEEGQQTGFLACSVEEYADAMVRIVSMPEMERLKMAAAARRRAGRFSEQRFYDDFKAAVHPILCHISR*