Report for Sequence Feature Glyma07g31270
Feature Type: gene_model
Chromosome: Gm07
Start: 36264756
stop: 36266819
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g31270
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
PTHR11474 Panther
TYROSINASE
JGI ISS
PTHR11474:SF5 Panther
5,6-DIHYDROXYINDOLE-2-CARBOXYLIC ACID OXIDASE
JGI ISS
PF00264 PFAM
Common central domain of tyrosinase
JGI ISS
PF12142 PFAM
Polyphenol oxidase middle domain
JGI ISS
PF12143 PFAM
Protein of unknown function (DUF B2219)
JGI ISS
UniRef100_A2Q4Q3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Polyphenol oxidase n=1 Tax=Medicago truncatula RepID=A2Q4Q3_MEDTR
SoyBase E_val: 6.00E-145 ISS
UniRef100_I1KLG6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KLG6_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g31270
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma07g31270 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g193300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g31270
Coding sequences of Glyma07g31270
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g31270.1 sequence type=CDS gene model=Glyma07g31270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCTTCTACATCACATCCATCCTTTTGGTCCCTCCTGAACCTGTCTGCATCCATTCCCATTTCTTCTTCCGTATGCATGTTCCCACCGTCTAAAAAACCTAGCAAAGCAACAAAACGGCGTCATGCTTGGGAAGTAGCATGCAATGGTAACCCTAGAAATAGGAGGGACATTCTGATCGGCCTTGGAGGACTCTATGGTGCTACAACAAGTCTCACAAGTAACAACACTGGTTCTGCATTTGGTGCTTCATTGTCGCCTCCAGATCCAACTAACTGCGTTCAACCGGACCCAGAAAAAGACCCTTTTTGCCCACCACCCCCCTTCAAAGACTACGAGCTCCCTCCACACGATGACAAGACATTACCCCTTCGAATTAGACCAGCTGCTCATTTGGTCACTGATGATTACATAGCCAAGTACGAGGAAGCCGTGAGGCGCATGCAAGACCTTCCACCTGATGATCCTCGCAGTTTCATGCAACAGGCCAATGTCCACCGTGCCTACTGCGATGGTCGCGGCTATACTCAAAAGGGCTTCGCTGACTACAAGCTTGACGTTCACGGCTCCTGGATATTCTTTCCTTGGCACCGCTGGTATCTCTATTTCTATGAGAAAATCTTGGGGAAGATGATCGGTGACCCCACTTTCGCTCTTCCGTTTTGGAACTGGGACAATCCCGCCGGCATGAGAATCCCTCCCATTTTCACAGACAAAAGTTCGCCTCTCTACGACGAACACAGGAATAGCGATCATGTAAATGCTTTCATCGACCTAGACTACAAGAAGGACGATTCTCCTGTGAAACCTCCTCAAACAATTTTATGGCCGCCAGTGGAGAAAAAGAATAACTCGATCGTCGACAACTTGATCGTCAACAACTTGATAAAAGTTTATACGGCAGTTGCAAGCAAAACCAACTCAAGCCCAGACTACTTCCTCGGGCCAGCATTCGAAGCTGGTTCTGCACCTCAGCAACACTTTGGATCTCTGGAATCTTTGCACAATACTGTCCACAGCTGGACCGGTGAAAGAGAAAACAATCACCACGACATGGGGTTGTTGGCTACGGCTGCAAAAGATCCCATTTTCTTTGCTCACCATTCAAACGTCGATAGGATGTGGAACATATGGAAGACAGAATTGCTGGATGGAAGAAGATTTGATCACAAAAGTGACGACTGGTTGGAATCCAGTTTCTTCTTCTACGACGAGAACAAGAACTATGTGCGTGTGAAGGTCAAAGACTGCCTCGACTCCAAGAAGATGGGGTATGATTACCAACGTGTTGACCTTCCATGGCTGTTGGCTGGGGAACTCATCAAACCAAAGAAGGAGATTATTCTCCTTCGTTCAAAACCAGAAGCTTCAACATTCAAGACATTACAGCTCCCTCTCCCTCTGGAATCCATTGAGCGTACAAACGTGAAGAGGCCGAAGCCGCGATCCAGGAACGAGAATGAAGAAGAAGAAGAAGGCGTAGAAGAGGTGTTAGTGATAGATGTTGAGTACGATAGCACTGATGGTGTGAGGTTTGATGTGTTCATCAACGACCAAGGCGACAATGAGATTGGACCCCAGGATTCAGAGTTTGCGGGAAGCTTTGTGACTTTGCCTCACTCGCCGCATGTCAACCATAACAACATCACCAAAGCTTCTTTCAAATTGCCATTAACGTATAAGTTGAAAGACTTGGGAGTAACAAAAGACGATGATAGTATTTCTGTCACACTGGCTCCCATATATGGGGACAAGCCTGTTACAATTAAGGACGTAAGGATAAAGCGTGTTTATCCTGAGGTGGACGATGAATAA
Predicted protein sequences of Glyma07g31270
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g31270.1 sequence type=predicted peptide gene model=Glyma07g31270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASSTSHPSFWSLLNLSASIPISSSVCMFPPSKKPSKATKRRHAWEVACNGNPRNRRDILIGLGGLYGATTSLTSNNTGSAFGASLSPPDPTNCVQPDPEKDPFCPPPPFKDYELPPHDDKTLPLRIRPAAHLVTDDYIAKYEEAVRRMQDLPPDDPRSFMQQANVHRAYCDGRGYTQKGFADYKLDVHGSWIFFPWHRWYLYFYEKILGKMIGDPTFALPFWNWDNPAGMRIPPIFTDKSSPLYDEHRNSDHVNAFIDLDYKKDDSPVKPPQTILWPPVEKKNNSIVDNLIVNNLIKVYTAVASKTNSSPDYFLGPAFEAGSAPQQHFGSLESLHNTVHSWTGERENNHHDMGLLATAAKDPIFFAHHSNVDRMWNIWKTELLDGRRFDHKSDDWLESSFFFYDENKNYVRVKVKDCLDSKKMGYDYQRVDLPWLLAGELIKPKKEIILLRSKPEASTFKTLQLPLPLESIERTNVKRPKPRSRNENEEEEEGVEEVLVIDVEYDSTDGVRFDVFINDQGDNEIGPQDSEFAGSFVTLPHSPHVNHNNITKASFKLPLTYKLKDLGVTKDDDSISVTLAPIYGDKPVTIKDVRIKRVYPEVDDE*