Report for Sequence Feature Glyma07g32283
Feature Type: gene_model
Chromosome: Gm07
Start: 37193049
stop: 37194746
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g32283
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G24010 AT
Annotation by Michelle Graham. TAIR10: cellulose synthase like G1 | chr4:12466391-12469760 FORWARD LENGTH=760
SoyBase E_val: 4.00E-48 ISS
GO:0000271 GO-bp
Annotation by Michelle Graham. GO Biological Process: polysaccharide biosynthetic process
SoyBase N/A ISS
GO:0006863 GO-bp
Annotation by Michelle Graham. GO Biological Process: purine nucleobase transport
SoyBase N/A ISS
GO:0030244 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0016740 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity
SoyBase N/A ISS
GO:0016757 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups
SoyBase N/A ISS
GO:0016759 GO-mf
Annotation by Michelle Graham. GO Molecular Function: cellulose synthase activity
SoyBase N/A ISS
GO:0016760 GO-mf
Annotation by Michelle Graham. GO Molecular Function: cellulose synthase (UDP-forming) activity
SoyBase N/A ISS
PTHR13301 Panther
X-BOX TRANSCRIPTION FACTOR-RELATED
JGI ISS
PTHR13301:SF23 Panther
JGI ISS
PF03552 PFAM
Cellulose synthase
JGI ISS
UniRef100_B9STK2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Cellulose synthase, putative n=1 Tax=Ricinus communis RepID=B9STK2_RICCO
SoyBase E_val: 1.00E-90 ISS
UniRef100_UPI0002338344 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338344 related cluster n=1 Tax=unknown RepID=UPI0002338344
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g32283
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma07g32283
Paralog Evidence Comments
Glyma13g24270 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g32283 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g202000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g32283
Coding sequences of Glyma07g32283
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g32283.1 sequence type=CDS gene model=Glyma07g32283 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGACCCTTCCTCTGAATACCATCCATGTCCAAAACCTATTAGTTATCATCAATAGGTTACACATGCTACTCCACTCCACTGCACTAGCCTTCTTGTTCTATTACAGACTGTGCTTTCTTTTCCAACCCTCAGAAACAATAGAAAGCCACTCGTTACCATGGCTACTTGTTTTTGCTTCAGAGATCATTCTCTCCTTCATTTGGATCCTTGACCAAGCTTATCGTTGGCATCCCGTTTTGCGGTCCATTTTCCAGGAAAGATTGCTGGAGGATCACAAGCTTCCTTCTATTGATGTGTTCATATGCACTGCTGATCCAACCAAGGAGCCCACTTTGGATGTGATGAACACAGTTCTATCAGCCATGGCACTGGATTACCCTCCACAGAAACTTCATATGTATGTTTCGGATGAAGGAGGGTCTCCTTTGACTCTTCATGGGGTGAGGGAGGCTTCGAAGTTTGCTACGAGTAGTGTGTACATGGAAGATAAGCAAAAGATCAAGGAAAAGTACGAGGCTTTTAAAGAGGAGATAAAGACTTTCAGAAAAGATAGGACATTTTCCAGAGATCACCCTTCTGTCAATGAGGTGATGCAAGAAACTATCATTGATGATGCAGATAATGTCAAAATGCCTCTCCTTGTCTGTGTTTCTCGCGAGAAAAAGCCTTCTGATCCCCACCATTTCAAGGCTGGAGCATTCAATGTCCTTCTTCGTGCCTCTTCCGTGATGAGTAATTCTCCATACATTCTAGTTCTAGATTGTGACATGTTCTGTAATGATCCAACTTCAGCTTGA
Predicted protein sequences of Glyma07g32283
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g32283.1 sequence type=predicted peptide gene model=Glyma07g32283 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
METLPLNTIHVQNLLVIINRLHMLLHSTALAFLFYYRLCFLFQPSETIESHSLPWLLVFASEIILSFIWILDQAYRWHPVLRSIFQERLLEDHKLPSIDVFICTADPTKEPTLDVMNTVLSAMALDYPPQKLHMYVSDEGGSPLTLHGVREASKFATSSVYMEDKQKIKEKYEAFKEEIKTFRKDRTFSRDHPSVNEVMQETIIDDADNVKMPLLVCVSREKKPSDPHHFKAGAFNVLLRASSVMSNSPYILVLDCDMFCNDPTSA*