Glyma.08g064700

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Report for Sequence Feature Glyma.08g064700

Feature Type:	gene_model
Chromosome:	Gm08
Start:	4956340
stop:	4959142
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.08g064700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G58290.1	AT	Glutamyl-tRNA reductase family protein	JGI	N/A	IEA
GO:0006098	GO-bp	pentose-phosphate shunt	JGI	N/A	IEA
GO:0006779	GO-bp	porphyrin-containing compound biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0006782	GO-bp	protoporphyrinogen IX biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0033014	GO-bp	tetrapyrrole biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0033014	GO-bp	tetrapyrrole biosynthetic process	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0004616	GO-mf	phosphogluconate dehydrogenase (decarboxylating) activity	JGI	N/A	IEA
GO:0008883	GO-mf	glutamyl-tRNA reductase activity	EnsemblGenomes	N/A	IEA
GO:0008883	GO-mf	glutamyl-tRNA reductase activity	JGI	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0050661	GO-mf	NADP binding	EnsemblGenomes	N/A	IEA
GO:0050661	GO-mf	NADP binding	JGI	N/A	IEA
PTHR13812	Panther	ORNITHINE CYCLODEAMINASE-RELATED	JGI	N/A	IEA
PTHR13812:SF14	Panther		JGI	N/A	IEA
PF00745	PFAM	Glutamyl-tRNAGlu reductase, dimerisation domain	JGI	N/A	IEA
PF01488	PFAM	Shikimate / quinate 5-dehydrogenase	JGI	N/A	IEA
PF05201	PFAM	Glutamyl-tRNAGlu reductase, N-terminal domain	JGI	N/A	IEA
PWY-5188	SoyCyc9	tetrapyrrole biosynthesis I (from glutamate)	Plant Metabolic Network		ISS
PWY-5918	SoyCyc9	superpathay of heme b biosynthesis from glutamate	Plant Metabolic Network		ISS
GN7V-55107	SoyCyc9-rxn	glutamyl-tRNA reductase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.08g064700

Locus	Gene Symbol	Protein Name
	GTR2	glutamyl-tRNA reductase 2

Expression Patterns of Glyma.08g064700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.08g064700

Paralog	Evidence	Comments
Glyma.07g184700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.08g064700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma08g06900	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.08g064700

Limit To All Plant Sequences

>Glyma.08g064700.1 sequence-type=CDS polypeptide=Glyma.08g064700.1.p locus=Glyma.08g064700 ID=Glyma.08g064700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGCCCTCGGTAGATCCTCCGCTGCCGCCACCACCTCCCTCTCCTCCTCCTCCGCCCGATTCCGCCGCTCCCTCCACCTACCGCCTTCCCAACTCTCCTTCCCGCGCGCGCGCTTTTCCGTCAACGCCACGTGCCCCTTCTTCTCCGATAACAATGGCAATAAGATTTCCCTTCCCCAAGACGTCGTCGCTTCCAAACCCTCCCCTCTCGAGTTGCTCAAAACTTCCGCCGCCGACAGATATACGAAGGAAAAGAGTAGCATTATTTGCATAGGGCTGAACATTCACACTGCTCCCGTTGAGATGCGTGAGAAGCTTTCCATTCCAGAATCGCATTGGGCTCAGGTCATCAAGGACCTTTGCGCTTTGAATCACATCGAAGAAGCCGCGGTTCTCAGCACGTGCAATCGCATGGAAATCTATGTTGTGGCTCTCTCTCAGCACCGTGGTGTTAAGGAGGTTACTGATTGGATGTCTAAGGTGAGTGGGATTTCAATACCTGAGCTTCGGGAGCACCAAGTTTTGCTGTATAACGCGTACGCCGCGCAGCATCTATTTGAAGTGGCGTCAGGGCTTGACTCACTTGTTCTTGGGGAAGGTCAAATTCTTGCTCAGGTGAAGCAGGTTGTGAAAGCTGGACAGGGAGTGCCTGGTTTTGATAAGAAAATCAGTGGTTTGTTCAAGCAGGCGATATCGGTTGGGAAGCGGGTTAGAACCGAGACTAACATTTCATCTGGATCAGTTTCTGTAAGCTCGGCTGCTGTGGAGCTTGCACTGATGAAGCTACCGGATTCCTCCTTTGCTGATTCTGGAGTGTTGGTGGTTGGTGCTGGGAAGATGGGGAAGCTTGTGATTAAGCATTTGGCTGCCAAAGGTTGCAGAAAGATGGTTGTTGTTAACAGGACTGAAGAGAAAGTTAATGCCATTCGGAAAGAGTTGAAGGATGTTGAGATTCTGTTTAGACCAATTTCAGATATGCTGGCGTGTGCTGCCGAAGCTGATGTGATCTTCACCAGCACGACGTCTGAATCATCGTTGTTTTCTAAAGAGAATGTGCAGATGCTTCCTCTGGTTAGTCATGGGAGAAGGCGGCTTTTTGTTGATATATCTATTCCTAGGAATGTGGAACCGAGTGTCTCGGATCTGGAGACTGCACTTGTGTACAATGTGGATGATCTGAAGGAAGTTGTTGCAGCTAACAAGGAGGACAGGCTTCAGAAAGCTGAGGAAGCCCGAGGAATTATACTAGAGGAGTTGAATAAATTTGAAGCGTGGAAAGACTCTCTGGAAACTGTTCCTACTATTAAGAAGTTTAGAGCTTATGTTGAGAGGATAAGAGCCTCTGAGATGGAGAAGTGTTTGTCGAAGATGGGCCCTGATGTCTCAAAGCAACACAAAGATGCAATTTATGCCCTTAGTATGGGTATTGTGAATAAGCTACTTCATGGTCCCATGCAGCACCTAAGGTGTGATGGGAAAAATGATAGTAGTCTGAGTGAAGTACTTGAGAATATGCGCGCCCTTAACAGAATGTATGATCTTGAGACAGAAACTTCCTTGATCGAAGAAAAGATCAGAGTCAAGATGGAACGGGTTCAGAAGTAG

Predicted protein sequences of Glyma.08g064700

Limit To All Plant Sequences

>Glyma.08g064700.1.p sequence-type=predicted peptide transcript=Glyma.08g064700.1 locus=Glyma.08g064700 ID=Glyma.08g064700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAALGRSSAAATTSLSSSSARFRRSLHLPPSQLSFPRARFSVNATCPFFSDNNGNKISLPQDVVASKPSPLELLKTSAADRYTKEKSSIICIGLNIHTAPVEMREKLSIPESHWAQVIKDLCALNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTDWMSKVSGISIPELREHQVLLYNAYAAQHLFEVASGLDSLVLGEGQILAQVKQVVKAGQGVPGFDKKISGLFKQAISVGKRVRTETNISSGSVSVSSAAVELALMKLPDSSFADSGVLVVGAGKMGKLVIKHLAAKGCRKMVVVNRTEEKVNAIRKELKDVEILFRPISDMLACAAEADVIFTSTTSESSLFSKENVQMLPLVSHGRRRLFVDISIPRNVEPSVSDLETALVYNVDDLKEVVAANKEDRLQKAEEARGIILEELNKFEAWKDSLETVPTIKKFRAYVERIRASEMEKCLSKMGPDVSKQHKDAIYALSMGIVNKLLHGPMQHLRCDGKNDSSLSEVLENMRALNRMYDLETETSLIEEKIRVKMERVQK*

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