Report for Sequence Feature Glyma.11G234600
Feature Type: gene_model
Chromosome: Gm11
Start: 32979921
stop: 32982422
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.11G234600
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G56200.1 AT
Transmembrane amino acid transporter family protein
JGI N/A IEA
GO:0003333 GO-bp
amino acid transmembrane transport
EnsemblGenomes N/A IEA
GO:0003333 GO-bp
amino acid transmembrane transport
JGI N/A IEA
GO:0016020 GO-cc
membrane
EnsemblGenomes N/A IEA
GO:0016021 GO-cc
integral component of membrane
EnsemblGenomes N/A IEA
GO:0015171 GO-mf
amino acid transmembrane transporter activity
EnsemblGenomes N/A IEA
KOG1305
KOG
Amino acid transporter protein
JGI N/A IEA
PTHR22950 Panther
AMINO ACID TRANSPORTER
JGI N/A IEA
PF01490 PFAM
Transmembrane amino acid transporter protein
JGI N/A IEA
Expression Patterns of Glyma.11G234600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.11G234600
Paralog Evidence Comments
Glyma.18g022400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.11G234600 Gene Call Version Wm82.a2.v1
Transcripts of Glyma.11G234600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.11g234600.2 sequence-type=transcript locus=Glyma.11g234600 ID=Glyma.11g234600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTCTTTTAAAAGTTTTTGATTCGGTATGCTTGTTCTGAATTTTCCGGGGTTTTCAGTCAGATTCATTTTGATTGGTGAACATGTTTTTTTCTTCTCTTTTTTACAAGGGGATGTGCTATCTGGAAAGCAAAATGGAGGTGAAGTGCATTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTCGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGTTTGGCTATCACAGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCGGTTAGACTACCAAACGTCATTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTCACATTTCATTTTAATGTGCATCCCATTGGGTTTGAGCTTGCCAAGGCATCCCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACCTTGCAATAGGTCTATTTGGGTACATGCTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATGCTGGTTCTGCAATTGGTTCCTTTCTCAATAGTTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTATTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCTAAGAAGCCTATGCTAGCCACAGACAACAAAAGATTTATGATCCTCACTCTGGTGCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTCCTGGGATCATCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAGAGATGTCCACGGTATATCAACAAGAAGAGACAAAATTATTGCACTGGTAATGATTATACTAGCCGTGGTTACAAGTGTGCTTGCCATTTCCACCAACATATTTAATGCTTTTAGTAGCAAGTCATAAATACAAGCTggttctctcttttctccccttctctctctctctctctctctctctctctctctctctctctctctctatatatatatatatatatatatatatatatatatatatattatagaaaaatttatttggggagagagggtgtgactggggagaTTCTAGGGGCAATTTGGTTGCTGTGGCGATTGTGTTACTTTTGTAATTTGGATGCCTTGTTTATTGTAGAATTCATATGTCTTGTGGCAGCATTTCTATGTAAAGTAGCAAATACTATTAAAGAAATGAAATCGACTTGATGGGTGACTAAGTTGCGCCATATCAAGTTTGTGCCGTGCAAGGATACAAATATTGATCAATTGTGCGCCAACTCGTTCTCATTATCGTTTGAATGGCTTAGGAAATACTAGTATAATAATAATAGCATTTGGCACATAA
Coding sequences of Glyma.11G234600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.11g234600.1 sequence-type=CDS polypeptide=Glyma.11g234600.1.p locus=Glyma.11g234600 ID=Glyma.11g234600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCACCGGTCGCCGGAGTCAGTGCCCCCCTCCTGGGGGAATCCAAAGCAGCGACGCCGCCGGCTTCCGTCCCCGGCGCGGTGTTCAACGTGGCGACAAGCATAGTCGGCGCCGGAATCATGTCGATTCCGGCGATCATGAAGGTTCTCGGCGTGGTGCCAGCATTCGCGATGATTCTCGTGGTGGCCGTTCTCGCGGAACTGTCGGTGGACTTCCTGATGCGGTTCACGCACTCCGGCGAAACGATGACGTACGCCGGCGTTATGAGGGAAGCGTTCGGATCGGCCGGAGCGTTGGCCGCGCAAGTTTGCGTCATCATCACCAACGTCGGGGGCTTAATTCTCTACCTTATCATCATCGGGGATGTGCTATCTGGAAAGCAAAATGGAGGTGAAGTGCATTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTCGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGTTTGGCTATCACAGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCGGTTAGACTACCAAACGTCATTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTCACATTTCATTTTAATGTGCATCCCATTGGGTTTGAGCTTGCCAAGGCATCCCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACCTTGCAATAGGTCTATTTGGGTACATGCTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATGCTGGTTCTGCAATTGGTTCCTTTCTCAATAGTTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTATTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCTAAGAAGCCTATGCTAGCCACAGACAACAAAAGATTTATGATCCTCACTCTGGTGCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTCCTGGGATCATCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAGAGATGTCCACGGTATATCAACAAGAAGAGACAAAATTATTGCACTGGTAATGATTATACTAGCCGTGGTTACAAGTGTGCTTGCCATTTCCACCAACATATTTAATGCTTTTAGTAGCAAGTCATAA
>Glyma.11g234600.2 sequence-type=CDS polypeptide=Glyma.11g234600.2.p locus=Glyma.11g234600 ID=Glyma.11g234600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTGTTCTGAATTTTCCGGGGTTTTCAGTCAGATTCATTTTGATTGGTGAACATGTTTTTTTCTTCTCTTTTTTACAAGGGGATGTGCTATCTGGAAAGCAAAATGGAGGTGAAGTGCATTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTCGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGTTTGGCTATCACAGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCGGTTAGACTACCAAACGTCATTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTCACATTTCATTTTAATGTGCATCCCATTGGGTTTGAGCTTGCCAAGGCATCCCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACCTTGCAATAGGTCTATTTGGGTACATGCTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATGCTGGTTCTGCAATTGGTTCCTTTCTCAATAGTTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTATTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCTAAGAAGCCTATGCTAGCCACAGACAACAAAAGATTTATGATCCTCACTCTGGTGCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTCCTGGGATCATCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAGAGATGTCCACGGTATATCAACAAGAAGAGACAAAATTATTGCACTGGTAATGATTATACTAGCCGTGGTTACAAGTGTGCTTGCCATTTCCACCAACATATTTAATGCTTTTAGTAGCAAGTCATAA
Predicted protein sequences of Glyma.11G234600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.11g234600.1.p sequence-type=predicted peptide transcript=Glyma.11g234600.1 locus=Glyma.11g234600 ID=Glyma.11g234600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSPVAGVSAPLLGESKAATPPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPAFAMILVVAVLAELSVDFLMRFTHSGETMTYAGVMREAFGSAGALAAQVCVIITNVGGLILYLIIIGDVLSGKQNGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMLPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAITALVQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASQMTTAVRLALLLCAVIYLAIGLFGYMLFGDSTQSDILINFDQNAGSAIGSFLNSLVRVSYALHIMLVFPLLNFSLRANIDEVLFPKKPMLATDNKRFMILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDVHGISTRRDKIIALVMIILAVVTSVLAISTNIFNAFSSKS*
>Glyma.11g234600.2.p sequence-type=predicted peptide transcript=Glyma.11g234600.2 locus=Glyma.11g234600 ID=Glyma.11g234600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLVLNFPGFSVRFILIGEHVFFFSFLQGDVLSGKQNGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMLPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAITALVQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASQMTTAVRLALLLCAVIYLAIGLFGYMLFGDSTQSDILINFDQNAGSAIGSFLNSLVRVSYALHIMLVFPLLNFSLRANIDEVLFPKKPMLATDNKRFMILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDVHGISTRRDKIIALVMIILAVVTSVLAISTNIFNAFSSKS*