Report for Sequence Feature Glyma.12g007500
Feature Type: gene_model
Chromosome: Gm12
Start: 553730
stop: 557753
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.12g007500
Proteins Associated with Glyma.12g007500
Locus Gene Symbol Protein Name
Phy purple acid phosphatase-like
PAP36 purple acid phosphatase 36
Expression Patterns of Glyma.12g007500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.12g007500
Paralog Evidence Comments
Glyma.09g229200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.12g007500 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma12g01000 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.12g007500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.12g007500.2 sequence-type=transcript locus=Glyma.12g007500 ID=Glyma.12g007500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCTTTTTCCTATGAGATGGAAGAAAAAATAAATAAGTGAGAGAGATACATGATGTGACGTGAATCAATATTATATTATAGTTTATACTTTATCATTATTTTTATCAGTTCACCGCTTCAACTTAACTGAAGCCATTCATTGGTTTGTTTCTCTTAGTCTTCGCGGTTAACGTAAACTGAACCGTGTTTTTGTCTTTCGAAGAAAACGATGGTAAATGTTGCTTGCTTCACGGACCCTCTGTCTTGTTGACCTCTAATGTGAATATTCCTCATCATATGCCATTCCATTCATTTAACAGTTAATGCACCCTTATCAATTTACCTTATACCAGTACTTATCATTATAAAGATCAGAGAGTGCATTGGAATAATAAATACGCGAGTGTTGCGACCCTGGATCACTAGAATCACGGGTTTTGAGCAAAATGGGTGTTGTGGAGGGTCTCTTGGCATTGGGTTTGATTCTGAATGTGTGTGTTGTGTGCAATGGAGGCACAAGCAGCCCCTTCGTCAGGAAAGTTGAGAAGGCTGTAGATATGCCACTTGACAGCGATGTCTTTGCTATTCCTCCTGGTTATAATGCCCCCCAGCAGGTTCATATAACGCAAGGTGACCTAGTGGGGAAAGCAGTGATCGTGTCATGGGTGACTGTGGATGAGCCGGGGTCGAGCGAAGTGCGTTACTGGAGTGAGAACAGTGACCAGAAGAAGATAGTTGAAGGAAAACTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAGGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTGACTCCTCCTGAAATCGGTCCCGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAAACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTACTATTCGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAACATTAGGTGGGATTCTTGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACTGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAAAGCATCTCAAAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCGTATGGAAAATATACACCACAATATAAATGGCTTGAAAAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACAATGAGAGTCATGTATGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATATTGTAAATGGTCTTTGTGCTCCTGTAAATGATAAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACAGAACCACAGCCAAAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAACGAACCGAACTCATGCTCACTATAGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCCGATTCCCTTTGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACTGCTCATGTTTCACATTAACACAGATTCACTTGTCTTATGAGAAGAATACCAAATGTCATGTCAATAAATTCATGAGTCGACAATTGATTGTGGCACTGCATAAACACAAAAACAGCTCCTTCTCAAATCCATCATCAAATACGCGTCTCAACATTTCTTCAGCACGGTAGCATTTTGATGCAGAAAAGATAAATCTTAGAGCTTTACCCTTTGCACCCCATTGATTGAATAGTAAAGGACGGTTGAAAATGGAAGCTGATCACAAAAAATTATAGTTTTGTTTTTGTTTTGCCACCTTCCATTGCCCTTATTCCTTCTTAAAGTATGTATGAATGTACAAGAGCTTAGGAGGAATCTGGTGTTTTACTGTGAATTTTGTTTTGAGATACTTGTCATAAATAAATTTGCAGAGTAATTATCGAATA
>Glyma.12g007500.3 sequence-type=transcript locus=Glyma.12g007500 ID=Glyma.12g007500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTATTCTGTTTTTCTGTCAATATAACTCTAGAGTTGAGAGGGAAGTGATGAATGATGCTTTGTTGCTTAGTGAATCAAGTTCATATAACGCAAGGTGACCTAGTGGGGAAAGCAGTGATCGTGTCATGGGTGACTGTGGATGAGCCGGGGTCGAGCGAAGTGCGTTACTGGAGTGAGAACAGTGACCAGAAGAAGATAGTTGAAGGAAAACTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAGGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTGACTCCTCCTGAAATCGGTCCCGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAAACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTACTATTCGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAACATTAGGTGGGATTCTTGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACTGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAAAGCATCTCAAAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCGTATGGAAAATATACACCACAATATAAATGGCTTGAAAAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACAATGAGAGTCATGTATGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATATTGTAAATGGTCTTTGTGCTCCTGTAAATGATAAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACAGAACCACAGCCAAAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAACGAACCGAACTCATGCTCACTATAGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCCGATTCCCTTTGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACTGCTCATGTTTCACATTAACACAGATTCACTTGTCTTATGAGAAGAATACCAAATGTCATGTCAATAAATTCATGAGTCGACAATTGATTGTATGTCAATACTACCAACATTGATTAGCAGTATCTTTATATCTCTGTCACATTTGATAAGTGCAAATTGCTTGCTTCTATTCTAAAACACCTTTCACTCGTATCATAACATTTTAGGTGGCACTGCATAAACACAAAAACAGCTCCTTCTCAAATCCATCATCAAATACGCGTCTCAACATTTCTTCAGCACGGTAGCATTTTGATGCAGAAAAGATAAATCTTAGAGCTTTACCCTTTGCACCCCATTGATTGAATAGTAAAGGACGGTTGAAAATGGAAGCTGATCACAAAAAATTATAGTTTTGTTTTTGTTTTGCCACCTTCCATTGCCCTTATTCCTTCTTAAAGTATGTATGAATGTACAAGAGCTTAGGAGGAATCTGGTGTTTTACTGTGAATTTTGTTTTGAGATACTTGTCATAAATAAATTTGCAGAGTAAT
Coding sequences of Glyma.12g007500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.12g007500.1 sequence-type=CDS polypeptide=Glyma.12g007500.1.p locus=Glyma.12g007500 ID=Glyma.12g007500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGTTGTGGAGGGTCTCTTGGCATTGGGTTTGATTCTGAATGTGTGTGTTGTGTGCAATGGAGGCACAAGCAGCCCCTTCGTCAGGAAAGTTGAGAAGGCTGTAGATATGCCACTTGACAGCGATGTCTTTGCTATTCCTCCTGGTTATAATGCCCCCCAGCAGGTTCATATAACGCAAGGTGACCTAGTGGGGAAAGCAGTGATCGTGTCATGGGTGACTGTGGATGAGCCGGGGTCGAGCGAAGTGCGTTACTGGAGTGAGAACAGTGACCAGAAGAAGATAGTTGAAGGAAAACTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAGGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTGACTCCTCCTGAAATCGGTCCCGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAAACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTACTATTCGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAACATTAGGTGGGATTCTTGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACTGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAAAGCATCTCAAAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCGTATGGAAAATATACACCACAATATAAATGGCTTGAAAAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACAATGAGAGTCATGTATGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATATTGTAAATGGTCTTTGTGCTCCTGTAAATGATAAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACAGAACCACAGCCAAAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAACGAACCGAACTCATGCTCACTATAGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCCGATTCCCTTTGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACTGCTCATGTTTCACATTAA
>Glyma.12g007500.2 sequence-type=CDS polypeptide=Glyma.12g007500.2.p locus=Glyma.12g007500 ID=Glyma.12g007500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGTTGTGGAGGGTCTCTTGGCATTGGGTTTGATTCTGAATGTGTGTGTTGTGTGCAATGGAGGCACAAGCAGCCCCTTCGTCAGGAAAGTTGAGAAGGCTGTAGATATGCCACTTGACAGCGATGTCTTTGCTATTCCTCCTGGTTATAATGCCCCCCAGCAGGTTCATATAACGCAAGGTGACCTAGTGGGGAAAGCAGTGATCGTGTCATGGGTGACTGTGGATGAGCCGGGGTCGAGCGAAGTGCGTTACTGGAGTGAGAACAGTGACCAGAAGAAGATAGTTGAAGGAAAACTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAGGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTGACTCCTCCTGAAATCGGTCCCGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAAACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTACTATTCGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAACATTAGGTGGGATTCTTGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACTGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAAAGCATCTCAAAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCGTATGGAAAATATACACCACAATATAAATGGCTTGAAAAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACAATGAGAGTCATGTATGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATATTGTAAATGGTCTTTGTGCTCCTGTAAATGATAAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACAGAACCACAGCCAAAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAACGAACCGAACTCATGCTCACTATAGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCCGATTCCCTTTGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACTGCTCATGTTTCACATTAA
>Glyma.12g007500.3 sequence-type=CDS polypeptide=Glyma.12g007500.3.p locus=Glyma.12g007500 ID=Glyma.12g007500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGCTTTGTTGCTTAGTGAATCAAGTTCATATAACGCAAGGTGACCTAGTGGGGAAAGCAGTGATCGTGTCATGGGTGACTGTGGATGAGCCGGGGTCGAGCGAAGTGCGTTACTGGAGTGAGAACAGTGACCAGAAGAAGATAGTTGAAGGAAAACTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAGGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTGACTCCTCCTGAAATCGGTCCCGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAAACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTACTATTCGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAACATTAGGTGGGATTCTTGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACTGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAAAGCATCTCAAAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCGTATGGAAAATATACACCACAATATAAATGGCTTGAAAAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACAATGAGAGTCATGTATGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATATTGTAAATGGTCTTTGTGCTCCTGTAAATGATAAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACAGAACCACAGCCAAAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAACGAACCGAACTCATGCTCACTATAGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCCGATTCCCTTTGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACTGCTCATGTTTCACATTAA
Predicted protein sequences of Glyma.12g007500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.12g007500.1.p sequence-type=predicted peptide transcript=Glyma.12g007500.1 locus=Glyma.12g007500 ID=Glyma.12g007500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVVEGLLALGLILNVCVVCNGGTSSPFVRKVEKAVDMPLDSDVFAIPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEVRYWSENSDQKKIVEGKLVTYRFFNYTSGFIHHTTIRNLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGNLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLWFFNRYWHPVDDSTAHVSH*
>Glyma.12g007500.2.p sequence-type=predicted peptide transcript=Glyma.12g007500.2 locus=Glyma.12g007500 ID=Glyma.12g007500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVVEGLLALGLILNVCVVCNGGTSSPFVRKVEKAVDMPLDSDVFAIPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEVRYWSENSDQKKIVEGKLVTYRFFNYTSGFIHHTTIRNLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGNLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLWFFNRYWHPVDDSTAHVSH*
>Glyma.12g007500.3.p sequence-type=predicted peptide transcript=Glyma.12g007500.3 locus=Glyma.12g007500 ID=Glyma.12g007500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMLCCLVNQVHITQGDLVGKAVIVSWVTVDEPGSSEVRYWSENSDQKKIVEGKLVTYRFFNYTSGFIHHTTIRNLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGNLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLWFFNRYWHPVDDSTAHVSH*