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Report for Sequence Feature Glyma.14g079600

Feature Type:gene_model
Chromosome:Gm14
Start:6840886
stop:6844586
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g079600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G33300.1AT ADR1-like 1 JGI N/AIEA
GO:0006952GO-bp defense response EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0043531GO-mf ADP binding EnsemblGenomesN/AIEA
GO:0043531GO-mf ADP binding JGI N/AIEA
KOG4658 KOG Apoptotic ATPase JGI N/AIEA
PTHR23155Panther LEUCINE-RICH REPEAT-CONTAINING PROTEIN JGI N/AIEA
PTHR23155:SF282Panther JGI N/AIEA
PF00560PFAM Leucine Rich Repeat JGI N/AIEA
PF00931PFAM NB-ARC domain JGI N/AIEA
PF05659PFAM Arabidopsis broad-spectrum mildew resistance protein RPW8 JGI N/AIEA

Expression Patterns of Glyma.14g079600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g079600
ParalogEvidenceComments
Glyma.17g245500 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g079600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g08710 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g079600
>Glyma.14g079600.1 sequence-type=CDS polypeptide=Glyma.14g079600.1.p locus=Glyma.14g079600 ID=Glyma.14g079600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCCTGAACGATTTTTTCGCGGGGGAGATCGCGACGGAGCTTCTGAAAATGCTGATCAGCATCTCCCGCAAGTCCCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCAGCTACATCCACGACCTCCTCCCCTCCATCGAGGAGATCAAGTACTCCGGCGTCGAGCTTCCTGCACTGCGCCAATCGCAACTCGACCGTCTCTCGGAGATTCTCCGCTCCGGCGTCGAGCTCTCCCACAAGGTCCTCTCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCAGCTCGCCAAGAAAATGGACAAGCTCGAGAAGAACGTCTCCAAGTTCCTGTTGGGTCCCTTGCAGGCACACATGTTGGCCGACATACACCACACCCGGTTCGAGATGACCGAGCGGTTCGACCGGGTCGATAACTCGGTTCAAAGATTGGAGAAGTATTTTGGGAATATGAAGATAGGTGTTGGCGGCGGCGGGTGGGTGGAGGAGGCTGTGAGGAGCGTGGACGAGGATGTTGTTGATAGTAGCTCTGCTGTCGGGTTGGGTTTCGGGAAGAATAAGGTTAGGGAGATGGTTGTCGGGAGGGATGATCTTTGGGTTGTCGGGATTTCCGGGATTGGTGGTTCCGGGAAAACCACTCTTGCTAGAGAGCTCTGCAAAGATGACCAAGTTAGATGTTATTTCAGGGATAGGATTTTGTTCCTGACCGTGTCGCAGTCACCGAATGTGGAGCAGCTAAGGACGAATATTTGGGAGTATATTATGGGCAACGAGAGGTTGGATGCAAATTACATGGTTCCCCAATGGATGCCACAGTTTGAGTGCAGAAGCGAAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACACTCTCCGTGGTGGACCAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTCTTGTGGTGTCAAGGCCTAAATTCCAAACGGTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCTTTAGCTGCTAATGAGAATTTGGTCAAGCAGGTTGTGACTGAGTGTGGAAGGCTTCCCTTGGCTCTTAAGGTGATTGGAGCTTCTTTGCGAGATCAAACTGAGATGTTTTGGTTGAGTGTTAAAAACAGGCTATCTCAGGGCCAAAGTATTGGGGAATCCCATGAAATCAATCTGATTGACAGAATGGCAATCAGTATCAATTACCTTCCAGAGAAGATCAAGGAGTGCTACTTGGACCTGTGTTGTTTTCCTGAGGATAAGAAAATCCCCCTTGATGTTCTCATCAATATATGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTGGTAGAGCTCTCCAACAAAAATCTCCTCACCTTAATGAAAGAGGCTCGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTGAGAGACCTGGCCCTTAATTTCAGAAACCGTGAGAGCATTGATGAACGCCGGCTATTAGTTATGCCAAAACGGGAGAATGGAATGCCTAAAGAGTGGTTGAGATACAGGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCACACAGGTGAAATGAAGGAAGTGGACTGGTGTAATCTAGAATTTCCAAAGGCTGAAGTGCTGATCATTAATTTCACATCCACTGAATACTTCTTGCCCCCTTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAATGTTTCAGTTTTCAAGAACTTGTCCAACTTAAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCCGAGTTATCAAGCATTGTCTTGGAAAACTTGGGAAAATTATTTATTGTCCTGTGCAAGGTTAATGACAGTTTGGTGGAAAAAGAAGTAGACTTGGCTCAAGTCTTCCCTAATCTCTTTGAGCTCACTCTTGATCACTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGTGGGATGAAGTCACTCCAGAACTTGAGTCTCACCAACTGCCACAATTTGACTGAATTACCAGTTGAACTAGGGAAACTAAGATCTCTAGAGATCCTACGTTTATATGCTTGTCCTTATCTGAAAACACTTCCTAATAGCATCTGTGACATGATGAGATTGAAGTATATTGACATTTCTCAATGTGTTAACTTGACATGCTTCCCTGAAAAGATTGGTAGATTGGTAAGCTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGAAATGTGCCAAAGTCTGCAGTGTCATTGCAATCTCTGAGGCTTGTAATTTGTGATGAGGAGGTATCTGGGATTTGGAAAGAGGTTGCCAAGCCTGATAATGTGCATATTCAAGTATCAGAGCAATACTTTGATTTGGACTGGCTCAAAGAGTGA
Predicted protein sequences of Glyma.14g079600
>Glyma.14g079600.1.p sequence-type=predicted peptide transcript=Glyma.14g079600.1 locus=Glyma.14g079600 ID=Glyma.14g079600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALNDFFAGEIATELLKMLISISRKSLLCRASADQLISYIHDLLPSIEEIKYSGVELPALRQSQLDRLSEILRSGVELSHKVLSSSRWNVYRNLQLAKKMDKLEKNVSKFLLGPLQAHMLADIHHTRFEMTERFDRVDNSVQRLEKYFGNMKIGVGGGGWVEEAVRSVDEDVVDSSSAVGLGFGKNKVREMVVGRDDLWVVGISGIGGSGKTTLARELCKDDQVRCYFRDRILFLTVSQSPNVEQLRTNIWEYIMGNERLDANYMVPQWMPQFECRSEARTLIVLDDVWTLSVVDQLVCRIPGCKFLVVSRPKFQTVLSYEVELLSEEDALSLFCHHAFGQKSIPLAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIDRMAISINYLPEKIKECYLDLCCFPEDKKIPLDVLINIWVEIHDIPETEAYAIVVELSNKNLLTLMKEARAGGMYSSCFEISVTQHDVLRDLALNFRNRESIDERRLLVMPKRENGMPKEWLRYRHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLIINFTSTEYFLPPFINRMPNLRALIIINYSATYACLHNVSVFKNLSNLRSLWLEKVSTPELSSIVLENLGKLFIVLCKVNDSLVEKEVDLAQVFPNLFELTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLTELPVELGKLRSLEILRLYACPYLKTLPNSICDMMRLKYIDISQCVNLTCFPEKIGRLVSLEKIDMRECSMIRNVPKSAVSLQSLRLVICDEEVSGIWKEVAKPDNVHIQVSEQYFDLDWLKE*






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