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Report for Sequence Feature Glyma.14g208300

Feature Type:gene_model
Chromosome:Gm14
Start:47397479
stop:47399732
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g208300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G16370.1AT acyl activating enzyme 5 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
KOG1176 KOG Acyl-CoA synthetase JGI N/AIEA
PTHR24095Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24095:SF26Panther JGI N/AIEA
PF00501PFAM AMP-binding enzyme JGI N/AIEA
PWY-361SoyCyc9 phenylpropanoid biosynthesis Plant Metabolic Network ISS
PWY-5754SoyCyc9 4-hydroxybenzoate biosynthesis I (eukaryotes) Plant Metabolic Network ISS
PWY-6320SoyCyc9 phaselate biosynthesis Plant Metabolic Network ISS
PWY-6457SoyCyc9 trans-cinnamoyl-CoA biosynthesis Plant Metabolic Network ISS
PWY-6982SoyCyc9 umbelliferone biosynthesis Plant Metabolic Network ISS
PWY1F-FLAVSYNSoyCyc9 flavonoid biosynthesis Plant Metabolic Network ISS
GN7V-53578SoyCyc9-rxn 4-coumarate-CoA ligase Plant Metabolic Network ISS

Expression Patterns of Glyma.14g208300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g208300
ParalogEvidenceComments
Glyma.02g239500 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g208300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g38920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g208300
>Glyma.14g208300.1 sequence-type=CDS polypeptide=Glyma.14g208300.1.p locus=Glyma.14g208300 ID=Glyma.14g208300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAACAGCTGAAGCCAAGCGCTCCTAACTCATCCCCTCTCACTCCACTCGCCTTCTTGGACAGAGCAGCCACCGTCTACGCCCACGTCCCTTCCCTAGTCTACAACCACACCACCTTCACCTGGTCCCTCACGCGCCGCCGATGCCTCCAGCTCGCCTCCTCCCTCTCCTCCCTCGGCATCCGCCGCGGCAGCGTCGTCTCCGTCCTCGCCCCGAACGTCCCCGCCATGTACGAGCTCCACTTCGCCGTCCCTTTCGCCGGCGCAATTCTCAACAACATCAACACCCGCCTCGACGCCCGCACCGTCTCCGTCATCCTCCGCCACGCGAACTCCAGGCTGGTCTTCGTCGACTGCGCCTCACGCGACCTCGTCCTCGAAGCCCTATCTCTCTTCCCTGAAAACCAAAATCAACGCCCAACCCTAATTCTCATCACAGACGAAACCGTGGAGAAAGAGAAAGCCGCACCCGCCGTTGATAATTTCCTCGACACCTACGAGGGGCTTGTAAGCAAGGGTGATCCGGGATTCAAGTGGGTCCTACCCAACTCCGAGTGGGACCCGATGGTACTTAACTACACTTCTGGAACGACGTCGTCTCCCAAAGGCGTTGTCCACTGCCACCGTGGAACGTTTATTATTTCAGTGGACACTCTTATTGATTGGGCTGTTCCGAAGAACCCGGTTTATCTCTGGACTCTTCCGATGTTCCATGCTAACGGGTGGAGCTTCCCGTACGGGATCGCTGCTGTGGGCGGAACTAATATCTGTGTCCGCAAGTTCGACGCTGAGATTGTTTACTCTCTCATAAAACGCCATCACGTGACTCACATGTGCGGCGCGCCGGTGGTGCTCAACATGCTAACCAACTCCCCTGATAATAAGCCGTTGGAGAAACCGGTTCAGATCCTCACCGCCGGAGCACCGCCGCCTGCGGCGGTGCTCTTCAGAACAGAGGCGTTGGGGTTTGTCGTGAGTCATGGATATGGCTTGACTGAGACCGGAGGGTTGGTGGTGTCGTGCGCGTGGAAGGGGGAGTGGAACAAGCTGCCGGCGACGGAGAGGGCAAGGCTGAAGGCGCGGCAGGGGGTAAGAACGGCGGGGATGGCGGAGGTGGACGTGGTGGGTCCCACCGGGGAGAGCGTGAAGCGCGACGGGGTTAGCATCGGAGAAGTTGTGATGAGAGGTGGGTGTGTGATGTTAGGTTACCTGAAAGACCCTTCAGGAACCGCGAGTTGTTTCAAGAACGGTTGGTTCTACACCGGGGATGTTGGCGTGATGCACGAAGATGGGTACTTGGAGATCAAAGATAGGTCAAAGGATGTTATAATCAGCGGCGGCGAGAATTTGAGCAGCGTCGAGGTGGAGTCGGTTCTGTACGGACACCCGGCGGTGAACGAGGCGGCGGTGGTGGCGCGGCCGCATGAGTATTGGGGAGAGACGCCGTGCGCGTTCGTGAGCTTGAAGAGAGAGATAAAAGAGAAAGAGAAACCCACTGAGAAGGAGATAATTGAGTATTGCAGGGATAACATGCCGCATTATATGGTTCCCAGAACGGTGATTTTCAAAGATGAGCTTCCTAAGACTTCTACGGGGAAGATACAGAAGTTTGTGCTGAGACAAATCGCCAAGGAGATGGGTTCCTTCACGCAAAGTCGAATCTGA
Predicted protein sequences of Glyma.14g208300
>Glyma.14g208300.1.p sequence-type=predicted peptide transcript=Glyma.14g208300.1 locus=Glyma.14g208300 ID=Glyma.14g208300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEQLKPSAPNSSPLTPLAFLDRAATVYAHVPSLVYNHTTFTWSLTRRRCLQLASSLSSLGIRRGSVVSVLAPNVPAMYELHFAVPFAGAILNNINTRLDARTVSVILRHANSRLVFVDCASRDLVLEALSLFPENQNQRPTLILITDETVEKEKAAPAVDNFLDTYEGLVSKGDPGFKWVLPNSEWDPMVLNYTSGTTSSPKGVVHCHRGTFIISVDTLIDWAVPKNPVYLWTLPMFHANGWSFPYGIAAVGGTNICVRKFDAEIVYSLIKRHHVTHMCGAPVVLNMLTNSPDNKPLEKPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLTETGGLVVSCAWKGEWNKLPATERARLKARQGVRTAGMAEVDVVGPTGESVKRDGVSIGEVVMRGGCVMLGYLKDPSGTASCFKNGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVVARPHEYWGETPCAFVSLKREIKEKEKPTEKEIIEYCRDNMPHYMVPRTVIFKDELPKTSTGKIQKFVLRQIAKEMGSFTQSRI*






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