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Report for Sequence Feature Glyma.20G124700

Feature Type:gene_model
Chromosome:Gm20
Start:36705436
stop:36711795
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20G124700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G15020.2AT quiescin-sulfhydryl oxidase 1 JGI N/AIEA
AT2G01270.1AT quiescin-sulfhydryl oxidase 2 JGI N/AIEA
GO:0045454GO-bp cell redox homeostasis EnsemblGenomesN/AIEA
GO:0045454GO-bp cell redox homeostasis JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0005615GO-cc extracellular space EnsemblGenomesN/AIEA
GO:0005623GO-cc cell EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0030173GO-cc integral component of Golgi membrane EnsemblGenomesN/AIEA
GO:0003756GO-mf protein disulfide isomerase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016853GO-mf isomerase activity EnsemblGenomesN/AIEA
GO:0016971GO-mf flavin-linked sulfhydryl oxidase activity EnsemblGenomesN/AIEA
GO:0016972GO-mf thiol oxidase activity EnsemblGenomesN/AIEA
GO:0016972GO-mf thiol oxidase activity JGI N/AIEA
KOG1731 KOG FAD-dependent sulfhydryl oxidase/quiescin and related proteins JGI N/AIEA
PTHR22897Panther QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE JGI N/AIEA
PTHR22897:SF3Panther JGI N/AIEA
PF00085PFAM Thioredoxin JGI N/AIEA
PF04777PFAM Erv1 / Alr family JGI N/AIEA
GN7V-41219SoyCyc9-rxn thiol oxidase Plant Metabolic Network ISS

Proteins Associated with Glyma.20G124700
LocusGene SymbolProtein Name
PDIQ-1A protein disulfide family pdiq-1a

Expression Patterns of Glyma.20G124700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.20G124700
ParalogEvidenceComments
Glyma.10g265900 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.20G124700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g124700 Wm82.a4.v1ISS As supplied by JGI
Glyma20g26050 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.20G124700
>Glyma.20g124700.2 sequence-type=transcript locus=Glyma.20g124700 ID=Glyma.20g124700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAAAAAAAAAAAAAACATAGGCGACAGAGGAAAGAGGGAGTGATTCAAGGTTTGGTGTCGAGAGATGTGTTTCCGCCATCTCCGATCCGAAGCAAAGCTTATGCAAACGTAATTCTCACCCTTTTCTGGTTCACCTTTCCCTTCCCAACAACACCCATCAAATCCAATCTCATATGCACACACAGCTACTTGCAGTTTCAACTAAACCCCTCTATCTCTCCCAATAAACTAAAGAAAAAAAGAAAACTGTAAGTAACAGATCCATTTCTCTCTCCACCTCACTTTCAAAAATCTCGCTTCTCTTCAATTTTCGGCCAATATCCTTCAAAACCCTAATCCTCTATCCCCTTTGATCCGCCCCGTTTTCCATTTCTGGGATGATGTATTTACATTTGGGTCTCTTTCTGTGCATTCTTTCTGTGTGCTGCTCTGCGACTTTGTCGTCTTCTTCCTTCGCGTCGCGCCGTTCGATCCTTCGAGAGGTTAGCGACAATGGCAAAAGTGGTGGAGATCATCCCGATTATGCCGTTGAGCTGAACGCCACGAATTTCGATGCCGTTCTTAAAGAGACCCCTGCTACTTTCGCCGTCGTTGAATTCTTTGCCCATTGGTGCCCTGCGTGCAGGAATTATAAGCCTCACTACGAAAAGGTTGCTAGATTGTTTAATGGGCCTGATGCAGTGCATCCAGGAATCATATTAATGACAAGGGTAGATTGTGCATCAAAGATAAATACTAAGCTATGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTTTTTTGGGGCCCTCCTTCAAAATTTGTTGGTGCTGGTTGGGAACCTAAACAAGAGAAAAGTGATATACGTGTGATTGATGATGCACGCACAGCTGATCGGTTGCTTAATTGGATCAACAAGCAATTAGGCAGTTCATTTGGCCTGGATGATCAGAAATTTCAAAATGAGCTTCTTTCATCCAATGTATCAGACCCCGGACAGATTGCAAGAGCTATCTATGATGTCGAAGAGGCAACTTCTACAGCTTTTGACATTATCCTAGAGCACAAGATGATAAAACCAGGAACTCGTACTTCACTTATAAAGTTTCTTCAGCTTTTAGCAGCCCATCATCCTTCTAGGAGATGCCGGAAGGGTACTGCTGAATTTCTTGTGAGCTTTGATGACTTGTACCCAACAGATTTTTGGTCAACTAATAAGCAGGAAGATGACAAGAGTTCAGTTAGGAACCTAAAGATTTGTGGAAAAGATGTGCCTCGAGGATACTGGATGTTTTGTCGTGGCAGTAAGAATGAAACCAGAGGCTTTAGTTGTGGTTTATGGGTTCTTCTGCATTCACTCTCTGTGAGGATTGATGATGGAGAGAGTCAGTTTACATTTAATGCAATATGTGATTTTGTTCACAACTTCTTCATCTGTGAGGAATGCCGACAACATTTCTACAAGATGTGTTCAAGCGTTTCTAGTCCTTTCAACAAAGCCCGTGACTTTGCTCTCTGGTTGTGGAGTTCCCATAACAAGGTAAACGAAAGATTGATGAAAGAAGAAGCATCCCTAGGCACTGCTGACCCCAAATTCCCAAAGACAATTTGGCCACCGAAGCAGCTTTGCTCTTCCTGTTACCTAAGTGTTGACCAGAGGAACAACAAAATTGAATGGAACCAAGATGAGGTCTTTAAGTTCTTGGCTGATTACTACAGTAAAACACTAGCGTCTCTGTACAAGGACAAGAGTATTGTCGGAAATGACGGAAGTGAAGGAGCTGTTGAAGATTTAATAGTAGCAACTAATGCAATTGTGGTGCCTGTGGGAGCTGCTTTGGCTATTGCTGTTGCTAGCTGTGCTTTTGGAGCACTTGCTTGCTACTGGCGTTCGCAGCAAAAGAGTCGGAAGCCTAGAAGAACGTGGAAGTAGGAATTGGAGACAAGTACACTTCAAGGCATGAGGTGCATAGCAGCTTTCATAGGCAACCAATTATTATGGTCTCACTCCAAAGAGCCTTGCCAAAGTTCCTTTTTGAATCTATCCTGAATAGAAAAATGTACAGAATACAATTCTTGATTTGGAGACCATTACTGATCTGTGCTATTTTCTTTCACTTTTTTGGCGTTGAGTTCGCATCTACTATACAGCCTAGGAATTTGGGGGAAAGGAGGACATGGCATGTAACATTTTTGTTTTGTAATTTGGGATTATTTTTTCAATATCAAAGTAACTGTATAAGCTAAAAGATTTTTATTTGATGGGTCTCAATGGTTCGGTTGAGTTTTCTAAAAGATTCCTGCGGATTAATTT
Coding sequences of Glyma.20G124700
>Glyma.20g124700.1 sequence-type=CDS polypeptide=Glyma.20g124700.1.p locus=Glyma.20g124700 ID=Glyma.20g124700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGTATTTACATTTGGGTCTCTTTCTGTGCATTCTTTCTGTGTGCTGCTCTGCGACTTTGTCGTCTTCTTCCTTCGCGTCGCGCCGTTCGATCCTTCGAGAGGTTAGCGACAATGGCAAAAGTGGTGGAGATCATCCCGATTATGCCGTTGAGCTGAACGCCACGAATTTCGATGCCGTTCTTAAAGAGACCCCTGCTACTTTCGCCGTCGTTGAATTCTTTGCCCATTGGTGCCCTGCGTGCAGGAATTATAAGCCTCACTACGAAAAGGTTGCTAGATTGTTTAATGGGCCTGATGCAGTGCATCCAGGAATCATATTAATGACAAGGGTAGATTGTGCATCAAAGATAAATACTAAGCTATGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTTTTTTGGGGCCCTCCTTCAAAATTTGTTGGTGCTGGTTGGGAACCTAAACAAGAGAAAAGTGATATACGTGTGATTGATGATGCACGCACAGCTGATCGGTTGCTTAATTGGATCAACAAGCAATTAGGCAGTTCATTTGGCCTGGATGATCAGAAATTTCAAAATGAGCTTCTTTCATCCAATGTATCAGACCCCGGACAGATTGCAAGAGCTATCTATGATGTCGAAGAGGCAACTTCTACAGCTTTTGACATTATCCTAGAGCACAAGATGATAAAACCAGGAACTCGTACTTCACTTATAAAGTTTCTTCAGCTTTTAGCAGCCCATCATCCTTCTAGGAGATGCCGGAAGGGTACTGCTGAATTTCTTGTGAGCTTTGATGACTTGTACCCAACAGATTTTTGGTCAACTAATAAGCAGGAAGATGACAAGAGTTCAGTTAGGAACCTAAAGATTTGTGGAAAAGATGTGCCTCGAGGATACTGGATGTTTTGTCGTGGCAGTAAGAATGAAACCAGAGGCTTTAGTTGTGGTTTATGGGTTCTTCTGCATTCACTCTCTGTGAGGATTGATGATGGAGAGAGTCAGTTTACATTTAATGCAATATGTGATTTTGTTCACAACTTCTTCATCTGTGAGGAATGCCGACAACATTTCTACAAGATGTGTTCAAGCGTTTCTAGTCCTTTCAACAAAGCCCGTGACTTTGCTCTCTGGTTGTGGAGTTCCCATAACAAGGTAAACGAAAGATTGATGAAAGAAGAAGCATCCCTAGGCACTGCTGACCCCAAATTCCCAAAGACAATTTGGCCACCGAAGCAGCTTTGCTCTTCCTGTTACCTAAGTGTTGACCAGAGGAACAACAAAATTGAATGGAACCAAGATGAGGTCTTTAAGTTCTTGGCTGATTACTACAGTAAAACACTAGCGTCTCTGTACAAGGACAAGAGTATTGTCGGAAATGACGGAAGTGAAGGAGCTGTTGAAGATTTAATAGTAGCAACTAATGCAATTGTGGTGCCTGTGGGAGCTGCTTTGGCTATTGCTGTTGCTAGCTGTGCTTTTGGAGCACTTGCTTGCTACTGGCGTTCGCAGCAAAAGAGTCGGAAGTATTTTCACCACCTACACTCTCTAAAGAACATTTGA

>Glyma.20g124700.2 sequence-type=CDS polypeptide=Glyma.20g124700.2.p locus=Glyma.20g124700 ID=Glyma.20g124700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGTATTTACATTTGGGTCTCTTTCTGTGCATTCTTTCTGTGTGCTGCTCTGCGACTTTGTCGTCTTCTTCCTTCGCGTCGCGCCGTTCGATCCTTCGAGAGGTTAGCGACAATGGCAAAAGTGGTGGAGATCATCCCGATTATGCCGTTGAGCTGAACGCCACGAATTTCGATGCCGTTCTTAAAGAGACCCCTGCTACTTTCGCCGTCGTTGAATTCTTTGCCCATTGGTGCCCTGCGTGCAGGAATTATAAGCCTCACTACGAAAAGGTTGCTAGATTGTTTAATGGGCCTGATGCAGTGCATCCAGGAATCATATTAATGACAAGGGTAGATTGTGCATCAAAGATAAATACTAAGCTATGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTTTTTTGGGGCCCTCCTTCAAAATTTGTTGGTGCTGGTTGGGAACCTAAACAAGAGAAAAGTGATATACGTGTGATTGATGATGCACGCACAGCTGATCGGTTGCTTAATTGGATCAACAAGCAATTAGGCAGTTCATTTGGCCTGGATGATCAGAAATTTCAAAATGAGCTTCTTTCATCCAATGTATCAGACCCCGGACAGATTGCAAGAGCTATCTATGATGTCGAAGAGGCAACTTCTACAGCTTTTGACATTATCCTAGAGCACAAGATGATAAAACCAGGAACTCGTACTTCACTTATAAAGTTTCTTCAGCTTTTAGCAGCCCATCATCCTTCTAGGAGATGCCGGAAGGGTACTGCTGAATTTCTTGTGAGCTTTGATGACTTGTACCCAACAGATTTTTGGTCAACTAATAAGCAGGAAGATGACAAGAGTTCAGTTAGGAACCTAAAGATTTGTGGAAAAGATGTGCCTCGAGGATACTGGATGTTTTGTCGTGGCAGTAAGAATGAAACCAGAGGCTTTAGTTGTGGTTTATGGGTTCTTCTGCATTCACTCTCTGTGAGGATTGATGATGGAGAGAGTCAGTTTACATTTAATGCAATATGTGATTTTGTTCACAACTTCTTCATCTGTGAGGAATGCCGACAACATTTCTACAAGATGTGTTCAAGCGTTTCTAGTCCTTTCAACAAAGCCCGTGACTTTGCTCTCTGGTTGTGGAGTTCCCATAACAAGGTAAACGAAAGATTGATGAAAGAAGAAGCATCCCTAGGCACTGCTGACCCCAAATTCCCAAAGACAATTTGGCCACCGAAGCAGCTTTGCTCTTCCTGTTACCTAAGTGTTGACCAGAGGAACAACAAAATTGAATGGAACCAAGATGAGGTCTTTAAGTTCTTGGCTGATTACTACAGTAAAACACTAGCGTCTCTGTACAAGGACAAGAGTATTGTCGGAAATGACGGAAGTGAAGGAGCTGTTGAAGATTTAATAGTAGCAACTAATGCAATTGTGGTGCCTGTGGGAGCTGCTTTGGCTATTGCTGTTGCTAGCTGTGCTTTTGGAGCACTTGCTTGCTACTGGCGTTCGCAGCAAAAGAGTCGGAAGCCTAGAAGAACGTGGAAGTAG
Predicted protein sequences of Glyma.20G124700
>Glyma.20g124700.1.p sequence-type=predicted peptide transcript=Glyma.20g124700.1 locus=Glyma.20g124700 ID=Glyma.20g124700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMYLHLGLFLCILSVCCSATLSSSSFASRRSILREVSDNGKSGGDHPDYAVELNATNFDAVLKETPATFAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWGPPSKFVGAGWEPKQEKSDIRVIDDARTADRLLNWINKQLGSSFGLDDQKFQNELLSSNVSDPGQIARAIYDVEEATSTAFDIILEHKMIKPGTRTSLIKFLQLLAAHHPSRRCRKGTAEFLVSFDDLYPTDFWSTNKQEDDKSSVRNLKICGKDVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRIDDGESQFTFNAICDFVHNFFICEECRQHFYKMCSSVSSPFNKARDFALWLWSSHNKVNERLMKEEASLGTADPKFPKTIWPPKQLCSSCYLSVDQRNNKIEWNQDEVFKFLADYYSKTLASLYKDKSIVGNDGSEGAVEDLIVATNAIVVPVGAALAIAVASCAFGALACYWRSQQKSRKYFHHLHSLKNI*

>Glyma.20g124700.2.p sequence-type=predicted peptide transcript=Glyma.20g124700.2 locus=Glyma.20g124700 ID=Glyma.20g124700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMYLHLGLFLCILSVCCSATLSSSSFASRRSILREVSDNGKSGGDHPDYAVELNATNFDAVLKETPATFAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWGPPSKFVGAGWEPKQEKSDIRVIDDARTADRLLNWINKQLGSSFGLDDQKFQNELLSSNVSDPGQIARAIYDVEEATSTAFDIILEHKMIKPGTRTSLIKFLQLLAAHHPSRRCRKGTAEFLVSFDDLYPTDFWSTNKQEDDKSSVRNLKICGKDVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRIDDGESQFTFNAICDFVHNFFICEECRQHFYKMCSSVSSPFNKARDFALWLWSSHNKVNERLMKEEASLGTADPKFPKTIWPPKQLCSSCYLSVDQRNNKIEWNQDEVFKFLADYYSKTLASLYKDKSIVGNDGSEGAVEDLIVATNAIVVPVGAALAIAVASCAFGALACYWRSQQKSRKPRRTWK*






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