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Report for Sequence Feature Glyma.20g026800

Feature Type:gene_model
Chromosome:Gm20
Start:2946177
stop:2950346
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20g026800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G13900.1AT Purple acid phosphatases superfamily protein JGI N/AIEA
GO:0016311GO-bp dephosphorylation EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0003993GO-mf acid phosphatase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG1378 KOG Purple acid phosphatase JGI N/AIEA
PTHR22953Panther ACID PHOSPHATASE RELATED JGI N/AIEA
PF00149PFAM Calcineurin-like phosphoesterase JGI N/AIEA

Proteins Associated with Glyma.20g026800
LocusGene SymbolProtein Name
PAP2 probable inactive purple acid phosphatase 2-like

Expression Patterns of Glyma.20g026800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20g026800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g03260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g026800
>Glyma.20g026800.1 sequence-type=CDS polypeptide=Glyma.20g026800.1.p locus=Glyma.20g026800 ID=Glyma.20g026800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTCCCGATCTACCCCTCCCCTTCCTCTTCTCCTTATTCATCATCTTCTTCCACCTCGCTGAATCCAAACCCTCCCTCACCGCCACGCCAACCACCCTCCCAGCCTCCGGCGCCACCGTCAATCTCCGCTGGTCCGGCATCCCTTCCCCCTCCGACCTCGACTTCCTCGCCATCTATTCCCCTCCGACCTCCCCGCACGACAACTTCATCGGATACCTCTTCCTCTCGCAGTCCGCCACGTGGCGCACCGGCTCCGGCAACCTCTCCCTCCCCCTCGTCGACCTCCGCTCCAACTACTCGTTCCGCATCTTCAGCTGGACCCGCGCCGAGATCAACCCCAAGCGCCAGGACCACGATCACAACCCTCTCCCGGTCACACGCCACCTCCTCGCGTTTTCGGAGGAGGTCTCCTTCGCCCCTCACCGTGGGCCCCAACAGATCCACCTGGCGTTCGTTGGGGCCCACGGCAAGGAGGAGGATATGCGCGTGATGTACATCACGCGCGATCCGAGAGAGACCTACGTAAGGTACGGGGAGAGGGAGGATAAGCTTGATGGGATTGCGGTCGCACGTGTGGAGAGGTACGAGAGGGAGCACATGTGCGACGCGCCTGCCAACACGAGTGTTGGGTGGAGGGACCCTGGGTTTATCCACGACGCCGTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAGGTTGGAAATGATAACGGAGGTTGGAGTGCAACTCAAAGTTTTGTGTCGAGGAATAGTGATTCAGACGAAACAATAGCTTTCCTGTTTGGTGACATGGGAACAGCTGTACCATACAATACGTTTCTGCGAACGCAGGATGAAAGCATATCAACCATGAAGTGGATCCTCCGTGATGTTGAAGCTCTAGGCGACACGCCAGCCTTTGTGTCGCACATTGGAGACATTAGTTATGCAAGAGGTTATTCCTGGTTGTGGGACCATTTTTTCGCCCAGATTGAACCTGTTGCCTCCCAAGTGGCATACCATGTTTGCATTGGCAATCATGAGTATGACTGGCCTTTGCAGCCATGGAAACCTGATTGGGCCAGTTATGGAAAAGATGGGGGTGGTGAGTGTGGTGTGCCTTACAGTTTAAGGTTTAACATGCCCGGAAACTCTTCAGAACTCACTGGAAATGCTGCAGCCCCACCAACTAGGAATCTTTATTACTCATTTGATATGGGAGCAGTACACTTTGTGTATATTTCCACGGAGACCAATTTTGTTCCTGGGAGCAAACAGTACGACTTCTTGAAGCATGATTTGGAATCGGTTAACAGGAGCAAGACTCCTTTTGTGGTGGTGCAAGGGCACAGGCCCATGTACACTACCAGCCATGAAAATAGGGATGCTGCTTTAAGAGGAAAGATGCTTGAGCACTTGGAACCTCTGTTGGTGAATAACAATGTGACACTTGCCCTTTGGGGTCATGTTCATAGATACGAGAGATTTTGTCCACTGAATAACTTCACTTGTGGTGTTAATGCGGGTCACAATGCAGGGGACAAAAAAGGATATACTGTTCACATTGTGATCGGCATGGCAGGGCAAGACTGGCAACCTGTCTGGGAACCAAGGCCAGACCATCCCGATGATCCAATCTTTCCACAGCCAAAATGGTCTCTGTACCGCGGAGGCGAGTTTGGGTACACAAGACTCGTCGCTACAAAGCAGAAGCTCGTGCTTTCTTATGTGGGAAACCATGACGGTGAGGTGCATGATCAGTTGGAAATTCTGGCATCTGGGGAAGTTGTCAGTGGTGACGGAGGCTGTAGTATTGCTGATGCTAATTCTAAAGCTGGAAATGTGATTGTGGAATCCACATTGTCTTGGTATGTCAAGGGAGGAAGTGTGCTGCTGCTTGGTGCATTCATGGGTTACGTTTTTGGTTACGTTACAAGTGCAAGGAAGAAGTCTGAGGTGCCAGAGAGCAATTGGACTCCGGTGAAGACTGAGGAAACTTGA
Predicted protein sequences of Glyma.20g026800
>Glyma.20g026800.1.p sequence-type=predicted peptide transcript=Glyma.20g026800.1 locus=Glyma.20g026800 ID=Glyma.20g026800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MIPDLPLPFLFSLFIIFFHLAESKPSLTATPTTLPASGATVNLRWSGIPSPSDLDFLAIYSPPTSPHDNFIGYLFLSQSATWRTGSGNLSLPLVDLRSNYSFRIFSWTRAEINPKRQDHDHNPLPVTRHLLAFSEEVSFAPHRGPQQIHLAFVGAHGKEEDMRVMYITRDPRETYVRYGEREDKLDGIAVARVERYEREHMCDAPANTSVGWRDPGFIHDAVLIGLKKGQRYYYKVGNDNGGWSATQSFVSRNSDSDETIAFLFGDMGTAVPYNTFLRTQDESISTMKWILRDVEALGDTPAFVSHIGDISYARGYSWLWDHFFAQIEPVASQVAYHVCIGNHEYDWPLQPWKPDWASYGKDGGGECGVPYSLRFNMPGNSSELTGNAAAPPTRNLYYSFDMGAVHFVYISTETNFVPGSKQYDFLKHDLESVNRSKTPFVVVQGHRPMYTTSHENRDAALRGKMLEHLEPLLVNNNVTLALWGHVHRYERFCPLNNFTCGVNAGHNAGDKKGYTVHIVIGMAGQDWQPVWEPRPDHPDDPIFPQPKWSLYRGGEFGYTRLVATKQKLVLSYVGNHDGEVHDQLEILASGEVVSGDGGCSIADANSKAGNVIVESTLSWYVKGGSVLLLGAFMGYVFGYVTSARKKSEVPESNWTPVKTEET*






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