Report for Sequence Feature Glyma02g40981
Feature Type: gene_model
Chromosome: Gm02
Start: 46187091
stop: 46191326
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g40981
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G66150 AT
Annotation by Michelle Graham. TAIR10: transmembrane kinase 1 | chr1:24631503-24634415 FORWARD LENGTH=942
SoyBase E_val: 1.00E-164 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0004675 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transmembrane receptor protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF467 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_C6ZRR4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: NAK-type protein kinase n=1 Tax=Glycine max RepID=C6ZRR4_SOYBN
SoyBase E_val: 0 ISS
UniRef100_I1JHU4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JHU4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma02g40981
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma02g40981 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g242800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g40981
Coding sequences of Glyma02g40981
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g40981.1 sequence type=CDS gene model=Glyma02g40981 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCCTCAGGGAACGTTGAGTAGCCATCTTTTTAATTGGCCAGAGGAAGGACTAGAACCACTGGAGTGGAATAGAAGATTGACAATTGCCTTGGATGTGGCAAGGGGTGTTGAGTACCTGCATAGCTTGGCCCATCAAAGCTTCATACATAGGGATTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCTATAGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCGCCAGAGTATGCAGTTACTGGCCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGGGTAATATTGATGGAGCTCATGACAGGAAGGAAAGCACTTGATGAGACTCAACCCGAGGATAGCATGCACCTTGTAACATGGTTCCGCAAAATGTCCATAAATAAGGACTCATTCCGCAAGGCCATAGACTCCGCCATGGAGCTCAATGAGGAAACGCTTGCTAGCATTCACACAGTAGCAGAGTTAGCCGGCCACTGCTGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAACGTGCTTTCTTCTCTTGTGGAACTCTGGAAACCATCTGATCAGAATTCTGAAGATATATATGGCATTGACCTTGACATGTCCCTACCACAAGCACTAAAGAAGTGGCAAGCTTACGAAGGTAGAAGCCAAATGGAGTCATCTTCTTCGTCTTCGCTACTTCCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCTTACGGATTTGCTGATTCTTTCACATCAGCAGATGGTAGGTGA
Predicted protein sequences of Glyma02g40981
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g40981.1 sequence type=predicted peptide gene model=Glyma02g40981 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MPQGTLSSHLFNWPEEGLEPLEWNRRLTIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELMTGRKALDETQPEDSMHLVTWFRKMSINKDSFRKAIDSAMELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR*