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Report for Sequence Feature Glyma05g37905

Feature Type:gene_model
Chromosome:Gm05
Start:41394899
stop:41397636
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma05g37905
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G41210AT Annotation by Michelle Graham. TAIR10: glutathione S-transferase THETA 1 | chr5:16492550-16493884 REVERSE LENGTH=245 SoyBaseE_val: 6.00E-125ISS
GO:0009407GO-bp Annotation by Michelle Graham. GO Biological Process: toxin catabolic process SoyBaseN/AISS
GO:0010583GO-bp Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005777GO-cc Annotation by Michelle Graham. GO Cellular Compartment: peroxisome SoyBaseN/AISS
GO:0004364GO-mf Annotation by Michelle Graham. GO Molecular Function: glutathione transferase activity SoyBaseN/AISS
KOG0867 KOG Glutathione S-transferase JGI ISS
PTHR11260Panther GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING JGI ISS
PTHR11260:SF8Panther GLUTATHIONE S-TRANSFERASE JGI ISS
PF02798PFAM Glutathione S-transferase, N-terminal domain JGI ISS
UniRef100_Q9FQD5UniRef Annotation by Michelle Graham. Best UniRef hit: Glutathione S-transferase GST 23 n=1 Tax=Glycine max RepID=Q9FQD5_SOYBN SoyBaseE_val: 0ISS
UniRef100_Q9FQD5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glutathione S-transferase GST 23 n=1 Tax=Glycine max RepID=Q9FQD5_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma05g37905
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma05g37905 not represented in the dataset
Glyma05g37905 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma05g37905 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.05g207000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma05g37905
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma05g37905
>Glyma05g37905.2   sequence type=transcript   gene model=Glyma05g37905   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GAAAATAAAAAATAATTTTTTAAATATTCAGTCTCAATCATCTAACATAACCTAACCAATTTATGATCGAGATGGTTGTAAAATTTTGAGTCCAACCCAACTCATTTCCGGTTCAGAAGGCTTGATGCACAACAGCCCCAAAAGGCGAAGCTAGTTGGGATAAAAAGGTAATTTGAAGAAAAAGAAAACAGAGGCTTAGGCAACTAAGAAAGAAAGATGAAGCTGAAGGTATATGCGGACCGCATGTCCCAGCCATCCCGTGCGGTTCTCATATTTTGCAAAGTGAATGGAATAGATTTTGAGGAGATCAAAGTCGATTTATCCAAACGTCAGCAGTTATCTCCCGAATTCCGAGCGGTTAACCCTTTAAGGAAAGTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTTGAGAGGAGTTGCAGACCATTGGTACCCGGCTGATCTTTCCAGGAGAGCAAGAATTCACTCGGTGTTAGATTGGCATCACCAGAATTTGCGTCGTGGAGCAGCTTCATTTGTTCTAAATACTGTACTAGCTCCACTATTGGGCCTACGAGCAAACCAACAAGCAGCTGCTGAAGCCGAGAAAATTTTGATTTCATCTTTGTCAACAATTGAGAACATTTGGCTTAAGGGGAATGGACAGTACTTGCTTGGTGGCTTGCGGCCATCCATAGCAGATCTCAGTCTGGTTTGTGAAATTATGCAATTAGAGCTTTTAGATGAGAAGGACCGTGATCGTATTCTTGGCCCTCACAAGAAGGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACGAGGCCTCATTTTGATGAAGTTCATACAATCCTCTATAAGCTCAAAACGAGGCTTTCTGAGCAGCAATCTAATCAGGCAGATGGCGTGATGCAATCTAGGATTAGAACCCCTCTAAGTTCAAAGATGTGAACAAACAACCATGCCAGTAACGTGCCTGTGACAACTTATATGTGTGTGTGTGTGTGTGTTGGCTGCAAGTATCACTGTATCAGGTTTGAAACATCAAAGATGAAGTTTATGTCTGTATTGAGACCCCTTAATCTAAGTAAGTTGGGCAGGTAATAAATGTGATTTCCACATGAAGATACAATCGTCTCCTCCTATGAGCAGATTTGGCGGCAATAATGTTAGTCTGTCCTTTATATTTGCCACGCACAATATTTTCTAGGAGCTGGTAAATTGCTGTAGTATAGACCTATGTTTTTTTGTTGAACCCGGATCTCCCTCGATCCAAGAGCCAATGACTAATTCCCCAAGGCCATGATTTGTACAATATAAATTTGTATGCATTATCCAATGGCAATGACGTGGGAACATTATGCAGCATTTGTATCAAAATTTGATTGAAATAAATTAATCCTAGTATATTAAAATTTTATTTTGGTCGGCT
Coding sequences of Glyma05g37905
>Glyma05g37905.1   sequence type=CDS   gene model=Glyma05g37905   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGCTGAAGGTATATGCGGACCGCATGTCCCAGCCATCCCGTGCGGTTCTCATATTTTGCAAAGTGAATGGAATAGATTTTGAGGAGATCAAAGTCGATTTATCCAAACGTCAGCAGTTATCTCCCGAATTCCGAGCGGTTAACCCTTTAAGGAAAGTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTTGAGAGTCATGCTATTCTCATATATCTTGCTTCTGCATTTCCAGGAGTTGCAGACCATTGGTACCCGGCTGATCTTTCCAGGAGAGCAAGAATTCACTCGGTGTTAGATTGGCATCACCAGAATTTGCGTCGTGGAGCAGCTTCATTTGTTCTAAATACTGTACTAGCTCCACTATTGGGCCTACGAGCAAACCAACAAGCAGCTGCTGAAGCCGAGAAAATTTTGATTTCATCTTTGTCAACAATTGAGAACATTTGGCTTAAGGGGAATGGACAGTACTTGCTTGGTGGCTTGCGGCCATCCATAGCAGATCTCAGTCTGGTTTGTGAAATTATGCAATTAGAGCTTTTAGATGAGAAGGACCGTGATCGTATTCTTGGCCCTCACAAGAAGGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACGAGGCCTCATTTTGATGAAGTTCATACAATCCTCTATAAGCTCAAAACGAGGCTTTCTGAGCAGCAATCTAATCAGGCAGATGGCGTGATGCAATCTAGGATTAGAACCCCTCTAAGTTCAAAGATGTGA

>Glyma05g37905.2   sequence type=CDS   gene model=Glyma05g37905   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAGGTTCAAGCTATTTGAGAGGAGTTGCAGACCATTGGTACCCGGCTGATCTTTCCAGGAGAGCAAGAATTCACTCGGTGTTAGATTGGCATCACCAGAATTTGCGTCGTGGAGCAGCTTCATTTGTTCTAAATACTGTACTAGCTCCACTATTGGGCCTACGAGCAAACCAACAAGCAGCTGCTGAAGCCGAGAAAATTTTGATTTCATCTTTGTCAACAATTGAGAACATTTGGCTTAAGGGGAATGGACAGTACTTGCTTGGTGGCTTGCGGCCATCCATAGCAGATCTCAGTCTGGTTTGTGAAATTATGCAATTAGAGCTTTTAGATGAGAAGGACCGTGATCGTATTCTTGGCCCTCACAAGAAGGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACGAGGCCTCATTTTGATGAAGTTCATACAATCCTCTATAAGCTCAAAACGAGGCTTTCTGAGCAGCAATCTAATCAGGCAGATGGCGTGATGCAATCTAGGATTAGAACCCCTCTAAGTTCAAAGATGTGA
Predicted protein sequences of Glyma05g37905
>Glyma05g37905.1   sequence type=predicted peptide   gene model=Glyma05g37905   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKLKVYADRMSQPSRAVLIFCKVNGIDFEEIKVDLSKRQQLSPEFRAVNPLRKVPAIVDGRFKLFESHAILIYLASAFPGVADHWYPADLSRRARIHSVLDWHHQNLRRGAASFVLNTVLAPLLGLRANQQAAAEAEKILISSLSTIENIWLKGNGQYLLGGLRPSIADLSLVCEIMQLELLDEKDRDRILGPHKKVQQWIESTRNATRPHFDEVHTILYKLKTRLSEQQSNQADGVMQSRIRTPLSSKM*

>Glyma05g37905.2   sequence type=predicted peptide   gene model=Glyma05g37905   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEGSSYLRGVADHWYPADLSRRARIHSVLDWHHQNLRRGAASFVLNTVLAPLLGLRANQQAAAEAEKILISSLSTIENIWLKGNGQYLLGGLRPSIADLSLVCEIMQLELLDEKDRDRILGPHKKVQQWIESTRNATRPHFDEVHTILYKLKTRLSEQQSNQADGVMQSRIRTPLSSKM*






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