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Report for Sequence Feature Glyma09g24440

Feature Type:gene_model
Chromosome:Gm09
Start:30160045
stop:30168165
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G25720AT Annotation by Michelle Graham. TAIR10: glutaminyl cyclase | chr4:13099929-13102470 REVERSE LENGTH=320 SoyBaseE_val: 5.00E-105ISS
GO:0009723GO-bp Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus SoyBaseN/AISS
GO:0017186GO-bp Annotation by Michelle Graham. GO Biological Process: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase SoyBaseN/AISS
GO:0031348GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0016603GO-mf Annotation by Michelle Graham. GO Molecular Function: glutaminyl-peptide cyclotransferase activity SoyBaseN/AISS
PF05096PFAM Glutamine cyclotransferase JGI ISS
UniRef100_I1L317UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L317_SOYBN SoyBaseE_val: 0ISS
UniRef100_O81226UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glutamine cyclotransferase n=1 Tax=Carica papaya RepID=O81226_CARPA SoyBaseE_val: 3.00E-110ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g131800 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma09g24440.1   sequence type=CDS   gene model=Glyma09g24440   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCTCTTCCGCATTCCTTTCCGTTTATCTCATTATCTCCGTCATCGTCCTTTTGTCGAACAGGTGCTGCGCGTTTCAATGCGGGGTTTCCTACGACACGATCACCGTCCTCAACGCGTTCCCTCACGACCCACAAGCCTTCACTGAGGGTCTTCTTTATCATGGAAATGACACCTTATTTGAGTCAACTGGCCTTTATGGGGAGTCATCCGTCCGTAAAGTTGCTCTTCGTACTGGGAAGGTTGAGAATATTCAGAAGATGGATGATTCTTTATTTGGTGAAGGCTTAGCTCTCCTCAATAATAGGCTGTTCCAGCTAAATTGGTTGCAGAAAGATGGTTTCATATATGAGCCAAAAAATTTAAGCCAAATAGGGACATTTAAATATGATATGAAAGAGGGTTGGGGTCTGGCAACTGATGGAAAAGTCTTGTTTGGAAGTGATGGCAGTTCAACATTGTATCAATTTGAGCCTCAACCATTTAAAGTTGTATCAAAACAAGTTGTTTACTACAAGGGTCATCAAGTGCACAATCTCAATGAATTGGAATACATAAATGGTGAAGTTTGGGCCAATGTTTTGCCGACTGACTGCATTGTAAGAATCTCTCCCCATGATGGAAGGGTTCTTGGATGGATTCTCCTCCAAAATTTGAGGAAAGAACTTGTGGAAGCTGGGGAGATTAGTGATCGTGATATTTTGAATGGGATAGCATGGGATGGTGAGCAGAATCGTATTTTTGTGACTGGAAAACAATGGCCAAAGCTGTATGAAATCAAGGTTTCACCTATAAAGAAACCAATTGAAGAAGGGATCATCGAGCAACTTTGCTTGTATGAGCCTTTGAATGGGGGATTTGTGTTGGCTGACCCAGCCCAAAGAGAATGA

>Glyma09g24440.1   sequence type=predicted peptide   gene model=Glyma09g24440   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASSAFLSVYLIISVIVLLSNRCCAFQCGVSYDTITVLNAFPHDPQAFTEGLLYHGNDTLFESTGLYGESSVRKVALRTGKVENIQKMDDSLFGEGLALLNNRLFQLNWLQKDGFIYEPKNLSQIGTFKYDMKEGWGLATDGKVLFGSDGSSTLYQFEPQPFKVVSKQVVYYKGHQVHNLNELEYINGEVWANVLPTDCIVRISPHDGRVLGWILLQNLRKELVEAGEISDRDILNGIAWDGEQNRIFVTGKQWPKLYEIKVSPIKKPIEEGIIEQLCLYEPLNGGFVLADPAQRE*







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