Report for Sequence Feature Glyma20g14970
Feature Type: gene_model
Chromosome: Gm20
Start: 20347049
stop: 20350263
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma20g14970
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G02410 AT
Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298). | chr2:632887-634613 FORWARD LENGTH=260
SoyBase E_val: 9.00E-59 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF05991 PFAM
Protein of unknown function (DUF901)
JGI ISS
UniRef100_I1NE86 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1NE86_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q75LE1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Expressed protein (With alternative splicing) n=2 Tax=Oryza sativa Japonica Group RepID=Q75LE1_ORYSJ
SoyBase E_val: 4.00E-40 ISS
Expression Patterns of Glyma20g14970
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma20g14970 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma20g14970
Coding sequences of Glyma20g14970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma20g14970.1 sequence type=CDS gene model=Glyma20g14970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTTCAATCATTCTTGAACATGTATATAAAGCCTAATCAATCAAAGCCAAATCATTTCACCAAAAACTTCTTTGCTACACTCTACACTCTTTGGTTTTTATTATTGCATTGCAAAGGAACACTTGAAAATGAATGGAGAAAAAAAGACGAAGGCGTGAAGAAGTTGAGTGAATTGCAATATGAAATTGAAAGCATTCTTTACACAAACCTGCAGGGTATATTACACAATGTGGTCCCTGTAGTTCTTGTGGATGGCTATAATGTGTGTGGCTATTGGATGAAGCTCAAGAAAGATTTCGTCAAAGGAAGACTTGATATTGCTCACCAAAAGCTGATTGATGAACTTCTAAGCTTTAGCATGCTTAGAGTGAAAATCGTTATTTTCTTTGATGCAATGATGTCTGGACTCCCCACTCACAAGGAAGATTTTGCTGGTTTATCTAGATCCGTCATTATTGCAGTGGGATTTTGTTTTTCAAAATTTTTCTTGATCCTATTTTCAGATGTATTAGAATCTCCTGCTTGCCTTGCTTTAGAATGTGGAATTCAAACAGTTATTAATGAATTAGTTGCAGCTTTAAAGGAGGATGGTTGCCCCAAAGTCTGGGTAGTCACTTCTAATCACTATCATCAGCAAGCAGCACATGGAGTTGGAACCTTTATTTGGAGTTGTAAGGCATTGGTTACTGAGATCAAGGCATCAAAAAAGGAGGTTGAAAGGATGCAAAATACAAAAAAAAAAAAGGCAAAAAATAATCTTACTTCTGATTCAAATGTTAGAGCATCCGCTTGTTTGGTAAAGTGCTCCTTGCTCTGCTAG
Predicted protein sequences of Glyma20g14970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma20g14970.1 sequence type=predicted peptide gene model=Glyma20g14970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MFQSFLNMYIKPNQSKPNHFTKNFFATLYTLWFLLLHCKGTLENEWRKKDEGVKKLSELQYEIESILYTNLQGILHNVVPVVLVDGYNVCGYWMKLKKDFVKGRLDIAHQKLIDELLSFSMLRVKIVIFFDAMMSGLPTHKEDFAGLSRSVIIAVGFCFSKFFLILFSDVLESPACLALECGIQTVINELVAALKEDGCPKVWVVTSNHYHQQAAHGVGTFIWSCKALVTEIKASKKEVERMQNTKKKKAKNNLTSDSNVRASACLVKCSLLC*
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