Report for Sequence Feature Glyma20g33531
Feature Type: gene_model
Chromosome: Gm20
Start: 42117682
stop: 42122352
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma20g33531
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G07040 AT
Annotation by Michelle Graham. TAIR10: NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926
SoyBase E_val: 4.00E-49 ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0009626 GO-bp
Annotation by Michelle Graham. GO Biological Process: plant-type hypersensitive response
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0000166 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleotide binding
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0043531 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ADP binding
SoyBase N/A ISS
KOG4658
KOG
Apoptotic ATPase
JGI ISS
PTHR23155 Panther
LEUCINE-RICH REPEAT-CONTAINING PROTEIN
JGI ISS
PTHR23155:SF121 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00931 PFAM
NB-ARC domain
JGI ISS
UniRef100_B9SU29 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SU29_RICCO
SoyBase E_val: 8.00E-166 ISS
UniRef100_I1NHT2 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1NHT2_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma20g33531
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma20g33531 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.20g193500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma20g33531
Coding sequences of Glyma20g33531
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma20g33531.1 sequence type=CDS gene model=Glyma20g33531 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCATTTCTTTGACATATACCGCCACGGCAATGAGGCGGAGCAGAGCACTGGCAGGCTGAGAGAAAGACTACTGATGAACTGTGAGCAAACAATTATAGACGTGTCCGTTGAAACTCCAGGTGCAGTGGAACAGAGCAATGACAGGCTAAGAAAAAGACTACTACTGAACTCTGAGCAAACAAATATAGACGTGTCCATTGAAACTCCAGGTGCAGTGGAACAGAGCACCGACAGGCCGAGAGAAAGACTACTACTGATCTCTGAGCAAACAAACATAGACGTTTCCGTTGAAACTCCAGGTGCAGTAGCCACAGCGCTGGAGAAGCTTGATCACATTCTGACTCAAAATTTAATTACCCTGGAAGATGTAATCAAGAGGGTAGGATATGTGAGAGACGACCTCCTTGGCGACACGCAAAATATTATCTTGTCTTCTAATTTAAGTTCAACAGCAGGGGAGTTGAGTCAGAGAGAAAAGTTGTGGCTGGAAGAGGTAAAGGATGTTTGTGATTACACGGTTGGTGTTGCTGAAAAATTCATTGCAAGAACAGAAAGACGGTTAAGCATGGGGAGGCTTTGGAAGGTCTTTTATCTTTATGGGCAATATGCTTCCGAGCAAGAATTTTCCAAGCAGATGGAGTATATCAGCACTCAGTTTGGAGATGCACTTTACAGAAGGTGGATTTTCGGAGATAGAGGGGACAAAATAGGATCAAGATCAAGACCTGTTGCATTTCCAAGCTTTAGCCCACCCGCTAACCTTTTTACAGTTATTGCCAGGACTGTGTCTTTGTGGAGGTCTTTGGACGAGAATTTGAAGACAAGCCAAAGATATTTAGCTCTAATGAGTGCGCTTTTCAGTGATATTGGAAGCGCGGACGAAGGCCTGAACCAGAGACAGAAAGTGTGGGTGAATCAATTAAAACTCGTGGCTCGGAAGGGAGAGTCTCTTGTTGCTGCGTATCCAAAGGATGGGTTTCCCTTTTCCGTCAGCAGATACAGATATGCCAAGAACATCAACCGCTTGTTGAATGAAATTATTCATATCTCAGACAGGAAGAACATCTATGACATTGCAAATATACAAGGCGGGAAACAGAATGAAAGCATTGCTGAAGACAATCACAATTCTCCCGATTCCATTTGCTACCGGGATACCACAGAACTCGATACTGGCGAAAAGCAATTGATGGATGCACTGTTACTTGATGTAAAACAGAGTGGATATGAAGACAATCACAATTCTCCCGATTCCATTTGCTACCGGGATACCACAGAGCTCGATTGGGAACTGGATTTAATCACTGGCGAAAAGCAATTGATGGATGCACTGTTACTTGATGTAAAACGGATTGGATATGAAGACCTAGATGGAAGATACAAAATCTGGGTGAACCAAATCAAAGGTATTGCCCGTGAAACGAAAGCTGTCATTGATGAGAGCGGTGGCCGTGAATTGGATCGTAAGCCAATGCTAAACAGGATTAGACAGAAAATTAAAGATGCCTCCAGAAGTAGAAAAGCACATTATGGTTTGGTTCAATGTGAATCCGGAGCTGAGTCATTACGTCCAAGGACACAACCATTTTTCAACGAAAACGTGAAGGTTTTGATGGCCCAGTTACTTTCGGATGAGAAATTTCGCTGCATTACTTCAATAGTTGGAATTAAAGGCACGGGTAAGACAAAACTAGCCAAAATGATACTTAGAAACGAAGCTGTCATTAATCATTTTGATTATAGAATCTTTGTGCCTCCAAGTTATGCAACAGTTGAACAGATTAAAGAATACATAGCCAAGAAGGCTGCAGAAATTATTAAGGGAGACAAACAAAACGCACTCGCAACCTTGGCGAGTAAAAAACATCTCATAGTTATTGATGGCATAGAAACTCCTCATGTCTTGGATACCTTGATAGAGATCATACCTGACATGTTAACAGCAAGCAGATTTCTTCTTACCACTCACAATGCAAATGTAGCCCAACAAGCAGGTATGAGATCCTTTGTTCACCCTTTACAGTTACTAGACGATGAAAACAGTTGGACTCTGTTCACAACAGATTTGAAGGTGAACATTCCCCTAGAATCAAAACTGTCCGAGACTGGGAAAAAAATTGTGGCTAAATGTGGTGGCCTGCCATTGGAAATAAGAAAAACGAGGAGTTTGCTTTCTGGCAAAGATGTGACACAAGAGGACTGGTCAAGCGTGCTAAAGCATCCCAATCTTCCATTGGAAATATTAAAAATAAGCAAATTGTTTTCGAGGAAAGATGTAACAGAAGAAAAGAAGTGGTCCAGCGTGCTCAAACATCCCGGCCTTCCATCAGAAATATTAAAAATAATCAAATTGCTTCGAAGGAAAGATTTGACAGAAGAGGAGTGGCCAAGCGTGCGTCAAAACCCTTGGTCTGACACACTTAACACGATCAACATCAACTTACCTTCACATCTGAGGCGATGCTTATTTTATTTTGAGCTATTCCCTGCTAATTTTGGGATTGCTGCAAGAAGATTAGTTGCTTTGTGGGTTGCAGAGGGTCTAGTGCATCATGGGGAAGACCAAGAGCCACCAGAGCAAGTTGCAGAAAGGTATTTAAAAGAGTTGATAGATCTGAACTTGGTTCAAATTGCCAAGAGCAAGCCCAATGGCACTGTCAAAACATGTCGTCTCCCTCATGCTTTGCACGATTTGTTGTTGAGAAAGCCTGAAGATGCTAGATTTCCTCAAGTATATACCAGCAAAGAGTTGATTGCAAACCAAAAATATCCCGAAATACGCGAGGTGGCTGATCGTCTTGATGAAAATCATAACTGGCACCAACATATTCATGGTAACATTACCAATGATTCACCTCAAGTGGGAACCTACTACAAGGGTGTTCACTCCTTCCTGTCCTTTGATTTTCGAGAAGGAAGTAGACCAGGCCAAGAATTATGTAACTTTCTGAACCTGTGTATTTCAAGCAACTGTCTTCTACTATTGCGGGTGCTTGATCTTGAAGGCGTTTACAAGCCCAAGTTGCCCGAAAGCATTGAAAGACTTACTCGGTTGAGGTATCTTGGCTTAAGATGGACTTATTTAGAGTCACTTCCATCATCTATAAGCAGCTTGCTGCAACTCCAGACTCTTGATCTGAAACATACTTACATACACACTCTAACCAGCTCCATCTGGAACATGAAACTGAGACATCTCTTCTTGAGTGAGACTTACCGGACCAGATTTCCATCCAAACCAAAAGGTACAGGTAATTCTCTATCTGACGTCCAAACAATGTGGGGTCTTTTCGTAGATGAAGAGACTCCGGTGAAGGGTGGTCTGGACCAATTGGTCAATATCACAAAACTGGGAATAGCATGCCAATCAATGTCACTACAGCAAGAGGTAATGGAATCACAACTTGATGCAGTAGCTGACTGGATTGTGAAACTAGAATACCTTCAATCACTGAGGCTTAAATCAAGAAATGAAGAAGGTCAACCTTGGAAAATAAACTTGAAGTCTTTGAAAAAACACAATAATCTCACTGACATGTATTTGCTGGGAAGCTTGACAAACGCATCTGTTCTGTTCCCCGAAAGCCTTGTTGAGCTTACCCTGTCACATTCCAAACTAGAGAACGACCCAATGAAAATTTTGAAAGATCTTCCAAACCTTCGATCATTGTCTTTGCTTGCAGAATCCTACGAGGGGGAAAAAATGATCTGCAAATCTAAAAGTTTTCCTCAGCTTTATGTCTTGAAAGTTTGGAATTTGAAGCAATTAAAGAATTGGTTGATAAAGCAACAAGCACTCCCCTCTCTCAGACAACTGGAAATCCGATCATGTCCTGGCTTGACAAATCTTCCTTTTGGACTGTGGCATGTTAAAAGTCTCCTTGAGTTGACACTGACAAACATGTCAAAGGAAATCAATATTGGCATATATCGCCTTCCGGACAATTGTAAAGTCCGCAGAGATAATTCTCAGTAG
Predicted protein sequences of Glyma20g33531
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma20g33531.1 sequence type=predicted peptide gene model=Glyma20g33531 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MHFFDIYRHGNEAEQSTGRLRERLLMNCEQTIIDVSVETPGAVEQSNDRLRKRLLLNSEQTNIDVSIETPGAVEQSTDRPRERLLLISEQTNIDVSVETPGAVATALEKLDHILTQNLITLEDVIKRVGYVRDDLLGDTQNIILSSNLSSTAGELSQREKLWLEEVKDVCDYTVGVAEKFIARTERRLSMGRLWKVFYLYGQYASEQEFSKQMEYISTQFGDALYRRWIFGDRGDKIGSRSRPVAFPSFSPPANLFTVIARTVSLWRSLDENLKTSQRYLALMSALFSDIGSADEGLNQRQKVWVNQLKLVARKGESLVAAYPKDGFPFSVSRYRYAKNINRLLNEIIHISDRKNIYDIANIQGGKQNESIAEDNHNSPDSICYRDTTELDTGEKQLMDALLLDVKQSGYEDNHNSPDSICYRDTTELDWELDLITGEKQLMDALLLDVKRIGYEDLDGRYKIWVNQIKGIARETKAVIDESGGRELDRKPMLNRIRQKIKDASRSRKAHYGLVQCESGAESLRPRTQPFFNENVKVLMAQLLSDEKFRCITSIVGIKGTGKTKLAKMILRNEAVINHFDYRIFVPPSYATVEQIKEYIAKKAAEIIKGDKQNALATLASKKHLIVIDGIETPHVLDTLIEIIPDMLTASRFLLTTHNANVAQQAGMRSFVHPLQLLDDENSWTLFTTDLKVNIPLESKLSETGKKIVAKCGGLPLEIRKTRSLLSGKDVTQEDWSSVLKHPNLPLEILKISKLFSRKDVTEEKKWSSVLKHPGLPSEILKIIKLLRRKDLTEEEWPSVRQNPWSDTLNTININLPSHLRRCLFYFELFPANFGIAARRLVALWVAEGLVHHGEDQEPPEQVAERYLKELIDLNLVQIAKSKPNGTVKTCRLPHALHDLLLRKPEDARFPQVYTSKELIANQKYPEIREVADRLDENHNWHQHIHGNITNDSPQVGTYYKGVHSFLSFDFREGSRPGQELCNFLNLCISSNCLLLLRVLDLEGVYKPKLPESIERLTRLRYLGLRWTYLESLPSSISSLLQLQTLDLKHTYIHTLTSSIWNMKLRHLFLSETYRTRFPSKPKGTGNSLSDVQTMWGLFVDEETPVKGGLDQLVNITKLGIACQSMSLQQEVMESQLDAVADWIVKLEYLQSLRLKSRNEEGQPWKINLKSLKKHNNLTDMYLLGSLTNASVLFPESLVELTLSHSKLENDPMKILKDLPNLRSLSLLAESYEGEKMICKSKSFPQLYVLKVWNLKQLKNWLIKQQALPSLRQLEIRSCPGLTNLPFGLWHVKSLLELTLTNMSKEINIGIYRLPDNCKVRRDNSQ*