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Locus Type:  SSR


Maps Containing Sct_033
Map NamePosition
GmComposite2003_F 74.12
GmConsensus40_F 56.466


Genomic Sequence Information for Sct_033
ChromosomeStart PosEnd PosMotifDerived FromPolymorphic*Assembly Version
Gm13 3073960830739666(ATCT)5(TC)11*(TA)10Wm82yesGlyma 1.0

*Polymorphic in the following germplasms:
Williams 82,  Noir 1,  Minsoy,  Archer,  Evans,  Peking,  Essex, and   PI 468916


QTLs Associated with Sct_033
Flooding yield index 1-4
Phytoph 11-21
Phytoph 12-1
Phytoph 9-3
Reproductive stage length 7-2
SDS 16-8
Seed height 1-9
Seed protein 36-18
Seed protein 36-23
Seed protein 36-24
Seed set 1-3


Amplification Info for Sct_033
More than one entry indicates that this SSR was independently identified by different labs sometimes using separate methodology resulting in unique primer pairs.
NameSct_033
Primer1CTTTTAAATTATAATAGCATGATCT
Primer2TGCTAATTTAGATTACGTTATGT
Motif(ATCT)5(TC)11*(TA)10
    
NameBARCSOYSSR_13_1230
Primer1CTTTTAAATTATAATAGCATGATCT
Primer2TGCTAATTTAGATTACGTTATGT
Motif(ATCT)5(TC)11*(TA)10
    


Information Providers
Song, Qijian and Cregan, Perry

References for Sct_033
Cregan et al. 1999A An integrated genetic linkage map of the soybean genome Crop Sci. 1999, 39(5):1464-1490






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