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Regions of Interest - assembly v2.0

Region-Pair NicknameRegion InterestchrAstartendchrBstartend
SCN1 & SCN2nematode resistanceGm181,666,4602,000,762Gm1132,603,86632,940,400
seed proteinseed compositionGm2033,343,65833,641,332Gm1037,621,92437,921,195
LG E & A2structural traitsGm1550,347,69650,653,388Gm0812,128,36712,550,870
Dt1 & Dt2morphologicalGm1945,033,35650,013,023Gm0340,372,37940,668,152
Rpp1 & Rpp2ASR resistanceGm1851,379,85451,682,831Gm0948,099,94848,398,414
isoflavone synthaseseed compositionGm0737,011,57137,320,614Gm1328,594,53228,895,103

Regions of Interest - assembly v1.0

Region-Pair NicknameRegion InterestchrAstartendchrBstartend
SCN1 & SCN2nematode resistanceGm181,666,0252,000,234Gm1137,055,90537,388,911
seed proteinseed compositionGm2032,200,00032,500,000Gm1037,095,00037,395,000
LG E & A2structural traitsGm1549,548,98149,854,667Gm0812,210,79812,633,244
Dt1 & Dt2morphologicalGm1944,829,74345,129,743Gm0342,384,07942,684,079
Rpp1 & Rpp2ASR resistanceGm1855,655,00055,955,000Gm0944,900,00045,200,000
isoflavone synthaseseed compositionGm0737,114,97737,414,977Gm1327,401,00027,701,000

Example configurations

Data repository for this project

Click here to view all publicly available data (sequence, alignment statistics, and methods).

Click here to explore Glycine species specific data.

Additional data for this project will be available late 2015, including assembled sequences for the "Regions of Interest", and transcriptome assemblies for each species.


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